Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27130 and PS417_27135 are separated by 58 nucleotides PS417_27135 and PS417_27140 are separated by 597 nucleotides
PS417_27130: PS417_27130 - Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) <small>(from data)</small>, at 5,856,571 to 5,857,935
_27130
PS417_27135: PS417_27135 - glutamine synthetase, at 5,857,994 to 5,859,352
_27135
PS417_27140: PS417_27140 - Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) <small>(from data)</small>, at 5,859,950 to 5,861,326
_27140
Position (kb) 5857
5858
5859
5860 Strain fitness (log2 ratio) -2
-1
0
1 at 5857.052 kb on + strand, within PS417_27130 at 5857.178 kb on + strand, within PS417_27130 at 5857.178 kb on + strand, within PS417_27130 at 5857.178 kb on + strand, within PS417_27130 at 5857.178 kb on + strand, within PS417_27130 at 5857.178 kb on + strand, within PS417_27130 at 5857.263 kb on + strand, within PS417_27130 at 5857.327 kb on + strand, within PS417_27130 at 5857.327 kb on + strand, within PS417_27130 at 5857.327 kb on + strand, within PS417_27130 at 5857.328 kb on - strand, within PS417_27130 at 5857.428 kb on + strand, within PS417_27130 at 5857.428 kb on + strand, within PS417_27130 at 5857.429 kb on - strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.430 kb on + strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.431 kb on - strand, within PS417_27130 at 5857.679 kb on + strand, within PS417_27130 at 5857.680 kb on - strand, within PS417_27130 at 5857.680 kb on - strand, within PS417_27130 at 5857.680 kb on - strand, within PS417_27130 at 5857.806 kb on - strand at 5857.806 kb on - strand at 5857.936 kb on - strand at 5857.936 kb on - strand at 5857.936 kb on - strand at 5857.947 kb on - strand at 5858.828 kb on + strand, within PS417_27135 at 5859.353 kb on - strand at 5859.353 kb on - strand at 5859.687 kb on + strand at 5859.688 kb on - strand at 5859.688 kb on - strand at 5860.026 kb on + strand at 5860.131 kb on + strand, within PS417_27140 at 5860.131 kb on + strand, within PS417_27140 at 5860.132 kb on - strand, within PS417_27140
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 5,857,052 + PS417_27130 0.35 -0.0 5,857,178 + PS417_27130 0.44 -0.1 5,857,178 + PS417_27130 0.44 +0.1 5,857,178 + PS417_27130 0.44 +0.7 5,857,178 + PS417_27130 0.44 +0.8 5,857,178 + PS417_27130 0.44 -0.1 5,857,263 + PS417_27130 0.51 +0.7 5,857,327 + PS417_27130 0.55 -0.8 5,857,327 + PS417_27130 0.55 -0.1 5,857,327 + PS417_27130 0.55 +0.0 5,857,328 - PS417_27130 0.55 -0.8 5,857,428 + PS417_27130 0.63 +0.3 5,857,428 + PS417_27130 0.63 +0.4 5,857,429 - PS417_27130 0.63 +0.9 5,857,430 + PS417_27130 0.63 -0.1 5,857,430 + PS417_27130 0.63 +0.0 5,857,430 + PS417_27130 0.63 +0.2 5,857,430 + PS417_27130 0.63 +0.2 5,857,430 + PS417_27130 0.63 +0.3 5,857,430 + PS417_27130 0.63 +0.6 5,857,430 + PS417_27130 0.63 -0.2 5,857,430 + PS417_27130 0.63 -1.1 5,857,431 - PS417_27130 0.63 -1.8 5,857,431 - PS417_27130 0.63 -0.9 5,857,431 - PS417_27130 0.63 -1.1 5,857,431 - PS417_27130 0.63 -0.5 5,857,431 - PS417_27130 0.63 -0.5 5,857,431 - PS417_27130 0.63 -0.2 5,857,431 - PS417_27130 0.63 -0.7 5,857,431 - PS417_27130 0.63 -0.2 5,857,679 + PS417_27130 0.81 -0.2 5,857,680 - PS417_27130 0.81 +0.4 5,857,680 - PS417_27130 0.81 +0.5 5,857,680 - PS417_27130 0.81 -0.1 5,857,806 - -0.2 5,857,806 - -0.7 5,857,936 - -0.4 5,857,936 - -0.8 5,857,936 - +0.3 5,857,947 - -0.7 5,858,828 + PS417_27135 0.61 -1.0 5,859,353 - -1.2 5,859,353 - -0.6 5,859,687 + +0.2 5,859,688 - -0.4 5,859,688 - +0.0 5,860,026 + -0.4 5,860,131 + PS417_27140 0.13 -0.5 5,860,131 + PS417_27140 0.13 +0.6 5,860,132 - PS417_27140 0.13 -0.5
Or see this region's nucleotide sequence