Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26360 and PS417_26365 are separated by 36 nucleotides PS417_26365 and PS417_26370 are separated by 82 nucleotides
PS417_26360: PS417_26360 - MFS transporter, at 5,700,041 to 5,700,889
_26360
PS417_26365: PS417_26365 - EmrB/QacA subfamily drug resistance transporter, at 5,700,926 to 5,702,353
_26365
PS417_26370: PS417_26370 - RNA helicase, at 5,702,436 to 5,703,821
_26370
Position (kb) 5700
5701
5702
5703 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5699.961 kb on + strand at 5699.962 kb on - strand at 5699.962 kb on - strand at 5699.963 kb on + strand at 5699.964 kb on - strand at 5699.995 kb on + strand at 5699.995 kb on + strand at 5699.995 kb on + strand at 5699.995 kb on + strand at 5699.996 kb on - strand at 5699.996 kb on - strand at 5699.996 kb on - strand at 5699.998 kb on + strand at 5699.998 kb on + strand at 5699.998 kb on + strand at 5699.998 kb on + strand at 5699.999 kb on - strand at 5699.999 kb on - strand at 5699.999 kb on - strand at 5700.083 kb on + strand at 5700.083 kb on + strand at 5700.084 kb on - strand at 5700.185 kb on - strand, within PS417_26360 at 5700.185 kb on - strand, within PS417_26360 at 5700.358 kb on + strand, within PS417_26360 at 5700.359 kb on - strand, within PS417_26360 at 5700.455 kb on + strand, within PS417_26360 at 5700.455 kb on + strand, within PS417_26360 at 5700.536 kb on + strand, within PS417_26360 at 5700.536 kb on + strand, within PS417_26360 at 5700.536 kb on + strand, within PS417_26360 at 5700.537 kb on - strand, within PS417_26360 at 5700.537 kb on - strand, within PS417_26360 at 5700.537 kb on - strand, within PS417_26360 at 5700.653 kb on + strand, within PS417_26360 at 5700.717 kb on - strand, within PS417_26360 at 5700.753 kb on - strand, within PS417_26360 at 5700.753 kb on - strand, within PS417_26360 at 5700.753 kb on - strand, within PS417_26360 at 5700.753 kb on - strand, within PS417_26360 at 5700.753 kb on - strand, within PS417_26360 at 5700.901 kb on + strand at 5700.901 kb on + strand at 5700.902 kb on - strand at 5701.098 kb on - strand, within PS417_26365 at 5701.416 kb on - strand, within PS417_26365 at 5702.008 kb on - strand, within PS417_26365 at 5702.015 kb on - strand, within PS417_26365 at 5702.399 kb on + strand at 5702.400 kb on - strand at 5702.441 kb on + strand at 5702.459 kb on + strand at 5702.463 kb on - strand at 5702.511 kb on + strand at 5702.650 kb on - strand, within PS417_26370 at 5702.841 kb on - strand, within PS417_26370 at 5702.934 kb on + strand, within PS417_26370 at 5703.148 kb on + strand, within PS417_26370 at 5703.149 kb on - strand, within PS417_26370
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 5,699,961 + +0.1 5,699,962 - +0.6 5,699,962 - +0.7 5,699,963 + +0.4 5,699,964 - +0.6 5,699,995 + -0.1 5,699,995 + +0.3 5,699,995 + -0.5 5,699,995 + -0.1 5,699,996 - -0.3 5,699,996 - +0.3 5,699,996 - -0.2 5,699,998 + -0.1 5,699,998 + +0.4 5,699,998 + +0.2 5,699,998 + -0.3 5,699,999 - -0.1 5,699,999 - +0.2 5,699,999 - +0.5 5,700,083 + -0.5 5,700,083 + -0.3 5,700,084 - -2.7 5,700,185 - PS417_26360 0.17 +1.1 5,700,185 - PS417_26360 0.17 +0.5 5,700,358 + PS417_26360 0.37 -0.1 5,700,359 - PS417_26360 0.37 -0.0 5,700,455 + PS417_26360 0.49 +0.2 5,700,455 + PS417_26360 0.49 -1.5 5,700,536 + PS417_26360 0.58 +0.4 5,700,536 + PS417_26360 0.58 -0.2 5,700,536 + PS417_26360 0.58 -0.5 5,700,537 - PS417_26360 0.58 -0.5 5,700,537 - PS417_26360 0.58 +1.1 5,700,537 - PS417_26360 0.58 -1.6 5,700,653 + PS417_26360 0.72 -0.3 5,700,717 - PS417_26360 0.80 +1.3 5,700,753 - PS417_26360 0.84 +0.2 5,700,753 - PS417_26360 0.84 -0.7 5,700,753 - PS417_26360 0.84 +2.0 5,700,753 - PS417_26360 0.84 -0.3 5,700,753 - PS417_26360 0.84 -0.0 5,700,901 + +0.3 5,700,901 + +1.1 5,700,902 - +0.9 5,701,098 - PS417_26365 0.12 -0.2 5,701,416 - PS417_26365 0.34 -2.3 5,702,008 - PS417_26365 0.76 -0.7 5,702,015 - PS417_26365 0.76 -0.5 5,702,399 + +1.1 5,702,400 - +1.1 5,702,441 + -0.0 5,702,459 + +0.7 5,702,463 - +0.8 5,702,511 + -0.1 5,702,650 - PS417_26370 0.15 -0.4 5,702,841 - PS417_26370 0.29 -0.1 5,702,934 + PS417_26370 0.36 -0.3 5,703,148 + PS417_26370 0.51 -0.1 5,703,149 - PS417_26370 0.51 +0.2
Or see this region's nucleotide sequence