Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24325 and PS417_24330 are separated by 366 nucleotides PS417_24330 and PS417_24335 are separated by 157 nucleotides
PS417_24325: PS417_24325 - ferredoxin-NADP reductase, at 5,279,689 to 5,280,465
_24325
PS417_24330: PS417_24330 - LuxR family transcriptional regulator, at 5,280,832 to 5,281,542
_24330
PS417_24335: PS417_24335 - 50S rRNA methyltransferase, at 5,281,700 to 5,282,824
_24335
Position (kb)
5280
5281
5282 Strain fitness (log2 ratio)
-1
0
1 at 5280.480 kb on + strand at 5280.523 kb on + strand at 5280.523 kb on + strand at 5280.523 kb on + strand at 5280.524 kb on - strand at 5280.524 kb on - strand at 5280.524 kb on - strand at 5280.563 kb on + strand at 5280.567 kb on + strand at 5280.568 kb on - strand at 5280.568 kb on - strand at 5280.570 kb on + strand at 5280.627 kb on - strand at 5280.637 kb on + strand at 5280.638 kb on - strand at 5280.651 kb on - strand at 5280.709 kb on - strand at 5280.724 kb on - strand at 5280.724 kb on - strand at 5280.724 kb on - strand at 5280.753 kb on - strand at 5280.764 kb on + strand at 5280.765 kb on - strand at 5280.765 kb on - strand at 5280.765 kb on - strand at 5280.807 kb on + strand at 5280.807 kb on + strand at 5280.808 kb on - strand at 5280.808 kb on - strand at 5280.919 kb on + strand, within PS417_24330 at 5280.937 kb on + strand, within PS417_24330 at 5281.004 kb on - strand, within PS417_24330 at 5281.004 kb on - strand, within PS417_24330 at 5281.027 kb on + strand, within PS417_24330 at 5281.028 kb on - strand, within PS417_24330 at 5281.052 kb on + strand, within PS417_24330 at 5281.052 kb on + strand, within PS417_24330 at 5281.052 kb on + strand, within PS417_24330 at 5281.053 kb on - strand, within PS417_24330 at 5281.053 kb on - strand, within PS417_24330 at 5281.053 kb on - strand, within PS417_24330 at 5281.259 kb on - strand, within PS417_24330 at 5281.277 kb on + strand, within PS417_24330 at 5281.278 kb on - strand, within PS417_24330 at 5281.298 kb on + strand, within PS417_24330 at 5281.322 kb on - strand, within PS417_24330 at 5281.343 kb on + strand, within PS417_24330 at 5281.343 kb on + strand, within PS417_24330 at 5281.344 kb on - strand, within PS417_24330 at 5281.344 kb on - strand, within PS417_24330 at 5281.418 kb on + strand, within PS417_24330 at 5281.461 kb on + strand, within PS417_24330 at 5281.461 kb on + strand, within PS417_24330 at 5281.462 kb on - strand, within PS417_24330 at 5281.462 kb on - strand, within PS417_24330 at 5281.680 kb on + strand at 5281.759 kb on + strand at 5281.760 kb on - strand at 5281.905 kb on + strand, within PS417_24335 at 5282.177 kb on + strand, within PS417_24335 at 5282.177 kb on + strand, within PS417_24335 at 5282.280 kb on - strand, within PS417_24335 at 5282.471 kb on + strand, within PS417_24335 at 5282.471 kb on + strand, within PS417_24335 at 5282.471 kb on + strand, within PS417_24335 at 5282.471 kb on + strand, within PS417_24335 at 5282.472 kb on - strand, within PS417_24335 at 5282.472 kb on - strand, within PS417_24335 at 5282.481 kb on + strand, within PS417_24335 at 5282.481 kb on + strand, within PS417_24335 at 5282.481 kb on + strand, within PS417_24335 at 5282.482 kb on - strand, within PS417_24335 at 5282.492 kb on + strand, within PS417_24335 at 5282.492 kb on + strand, within PS417_24335 at 5282.492 kb on + strand, within PS417_24335
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 5,280,480 + -0.8 5,280,523 + -0.9 5,280,523 + -0.7 5,280,523 + +1.0 5,280,524 - +0.1 5,280,524 - -1.0 5,280,524 - -0.3 5,280,563 + -0.3 5,280,567 + -1.1 5,280,568 - +0.4 5,280,568 - -0.2 5,280,570 + -0.4 5,280,627 - -0.3 5,280,637 + +0.6 5,280,638 - -1.1 5,280,651 - -0.3 5,280,709 - +1.3 5,280,724 - -0.1 5,280,724 - -0.1 5,280,724 - +0.4 5,280,753 - -0.2 5,280,764 + -0.1 5,280,765 - +0.4 5,280,765 - +0.2 5,280,765 - +0.4 5,280,807 + +0.0 5,280,807 + -0.1 5,280,808 - -0.4 5,280,808 - -0.5 5,280,919 + PS417_24330 0.12 -0.0 5,280,937 + PS417_24330 0.15 -0.3 5,281,004 - PS417_24330 0.24 -0.4 5,281,004 - PS417_24330 0.24 -0.5 5,281,027 + PS417_24330 0.27 -0.3 5,281,028 - PS417_24330 0.28 -0.4 5,281,052 + PS417_24330 0.31 -0.6 5,281,052 + PS417_24330 0.31 -1.2 5,281,052 + PS417_24330 0.31 -0.4 5,281,053 - PS417_24330 0.31 -0.2 5,281,053 - PS417_24330 0.31 +0.0 5,281,053 - PS417_24330 0.31 -0.6 5,281,259 - PS417_24330 0.60 +0.1 5,281,277 + PS417_24330 0.63 -1.1 5,281,278 - PS417_24330 0.63 +0.0 5,281,298 + PS417_24330 0.66 -0.5 5,281,322 - PS417_24330 0.69 +1.1 5,281,343 + PS417_24330 0.72 +0.7 5,281,343 + PS417_24330 0.72 -1.7 5,281,344 - PS417_24330 0.72 -0.3 5,281,344 - PS417_24330 0.72 -0.1 5,281,418 + PS417_24330 0.82 +0.3 5,281,461 + PS417_24330 0.88 -0.1 5,281,461 + PS417_24330 0.88 -0.1 5,281,462 - PS417_24330 0.89 -0.4 5,281,462 - PS417_24330 0.89 +0.3 5,281,680 + +1.6 5,281,759 + -0.6 5,281,760 - +0.5 5,281,905 + PS417_24335 0.18 +0.3 5,282,177 + PS417_24335 0.42 +0.8 5,282,177 + PS417_24335 0.42 +0.0 5,282,280 - PS417_24335 0.52 -1.6 5,282,471 + PS417_24335 0.69 +0.0 5,282,471 + PS417_24335 0.69 -0.4 5,282,471 + PS417_24335 0.69 +0.0 5,282,471 + PS417_24335 0.69 +0.3 5,282,472 - PS417_24335 0.69 -0.1 5,282,472 - PS417_24335 0.69 -0.2 5,282,481 + PS417_24335 0.69 +0.4 5,282,481 + PS417_24335 0.69 +0.2 5,282,481 + PS417_24335 0.69 +0.4 5,282,482 - PS417_24335 0.70 +0.3 5,282,492 + PS417_24335 0.70 -0.6 5,282,492 + PS417_24335 0.70 -0.3 5,282,492 + PS417_24335 0.70 +1.0
Or see this region's nucleotide sequence