Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23445 and PS417_23450 are separated by 149 nucleotides PS417_23450 and PS417_23455 overlap by 11 nucleotides PS417_23455 and PS417_23460 are separated by 98 nucleotides PS417_23460 and PS417_23465 overlap by 20 nucleotides
PS417_23445: PS417_23445 - aldolase, at 5,078,659 to 5,079,441
_23445
PS417_23450: PS417_23450 - membrane protein, at 5,079,591 to 5,080,277
_23450
PS417_23455: PS417_23455 - LrgA, at 5,080,267 to 5,080,638
_23455
PS417_23460: PS417_23460 - LysR family transcriptional regulator, at 5,080,737 to 5,081,633
_23460
PS417_23465: PS417_23465 - flavodoxin, at 5,081,614 to 5,082,069
_23465
Position (kb) 5080
5081 Strain fitness (log2 ratio) -2
-1
0
1 at 5079.303 kb on + strand, within PS417_23445 at 5079.497 kb on - strand at 5079.497 kb on - strand at 5079.497 kb on - strand at 5079.567 kb on + strand at 5080.109 kb on - strand, within PS417_23450 at 5080.152 kb on + strand, within PS417_23450 at 5080.153 kb on - strand, within PS417_23450 at 5080.182 kb on + strand, within PS417_23450 at 5080.182 kb on + strand, within PS417_23450 at 5080.182 kb on + strand, within PS417_23450 at 5080.183 kb on - strand, within PS417_23450 at 5080.183 kb on - strand, within PS417_23450 at 5080.183 kb on - strand, within PS417_23450 at 5080.223 kb on + strand at 5080.223 kb on + strand at 5080.223 kb on + strand at 5080.225 kb on + strand at 5080.225 kb on + strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.282 kb on + strand at 5080.283 kb on - strand at 5080.397 kb on + strand, within PS417_23455 at 5080.397 kb on + strand, within PS417_23455 at 5080.398 kb on - strand, within PS417_23455 at 5080.586 kb on + strand, within PS417_23455 at 5080.586 kb on + strand, within PS417_23455 at 5080.989 kb on - strand, within PS417_23460 at 5080.989 kb on - strand, within PS417_23460 at 5081.313 kb on + strand, within PS417_23460 at 5081.563 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 5,079,303 + PS417_23445 0.82 -0.5 5,079,497 - -0.4 5,079,497 - +0.1 5,079,497 - +0.1 5,079,567 + -0.6 5,080,109 - PS417_23450 0.75 -0.0 5,080,152 + PS417_23450 0.82 -0.0 5,080,153 - PS417_23450 0.82 -0.7 5,080,182 + PS417_23450 0.86 -0.1 5,080,182 + PS417_23450 0.86 +0.7 5,080,182 + PS417_23450 0.86 +0.2 5,080,183 - PS417_23450 0.86 -0.0 5,080,183 - PS417_23450 0.86 +0.5 5,080,183 - PS417_23450 0.86 -0.2 5,080,223 + +0.9 5,080,223 + -0.5 5,080,223 + -0.4 5,080,225 + -0.2 5,080,225 + +0.8 5,080,226 - +0.0 5,080,226 - -1.8 5,080,226 - +0.1 5,080,226 - +0.4 5,080,226 - +0.9 5,080,226 - -0.4 5,080,282 + -0.2 5,080,283 - -0.3 5,080,397 + PS417_23455 0.35 -0.5 5,080,397 + PS417_23455 0.35 -0.6 5,080,398 - PS417_23455 0.35 -0.2 5,080,586 + PS417_23455 0.86 -0.6 5,080,586 + PS417_23455 0.86 -0.9 5,080,989 - PS417_23460 0.28 +1.1 5,080,989 - PS417_23460 0.28 +0.3 5,081,313 + PS417_23460 0.64 +0.1 5,081,563 - +1.1
Or see this region's nucleotide sequence