Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23385 and PS417_23390 are separated by 3 nucleotides PS417_23390 and PS417_23395 are separated by 792 nucleotides
PS417_23385: PS417_23385 - cytochrome o ubiquinol oxidase subunit I, at 5,061,016 to 5,063,034
_23385
PS417_23390: PS417_23390 - ubiquinol oxidase subunit II, at 5,063,038 to 5,063,979
_23390
PS417_23395: PS417_23395 - disulfide bond formation protein B, at 5,064,772 to 5,065,278
_23395
Position (kb)
5063
5064 Strain fitness (log2 ratio)
-2
-1
0
1 at 5062.082 kb on + strand, within PS417_23385 at 5062.082 kb on + strand, within PS417_23385 at 5062.173 kb on - strand, within PS417_23385 at 5062.173 kb on - strand, within PS417_23385 at 5062.211 kb on + strand, within PS417_23385 at 5062.212 kb on - strand, within PS417_23385 at 5062.212 kb on - strand, within PS417_23385 at 5062.447 kb on + strand, within PS417_23385 at 5062.447 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.853 kb on + strand at 5062.853 kb on + strand at 5062.854 kb on - strand at 5062.854 kb on - strand at 5062.908 kb on - strand at 5062.925 kb on + strand at 5063.144 kb on + strand, within PS417_23390 at 5063.145 kb on - strand, within PS417_23390 at 5063.429 kb on + strand, within PS417_23390 at 5063.430 kb on - strand, within PS417_23390 at 5063.496 kb on + strand, within PS417_23390 at 5063.656 kb on - strand, within PS417_23390 at 5063.656 kb on - strand, within PS417_23390 at 5063.657 kb on + strand, within PS417_23390 at 5063.658 kb on - strand, within PS417_23390 at 5063.666 kb on + strand, within PS417_23390 at 5063.666 kb on + strand, within PS417_23390 at 5063.667 kb on - strand, within PS417_23390 at 5063.747 kb on + strand, within PS417_23390 at 5063.748 kb on - strand, within PS417_23390 at 5063.951 kb on - strand at 5064.073 kb on - strand at 5064.296 kb on + strand at 5064.297 kb on - strand at 5064.301 kb on - strand at 5064.308 kb on + strand at 5064.308 kb on + strand at 5064.309 kb on - strand at 5064.311 kb on - strand at 5064.322 kb on + strand at 5064.323 kb on - strand at 5064.354 kb on + strand at 5064.369 kb on - strand at 5064.369 kb on - strand at 5064.435 kb on - strand at 5064.465 kb on + strand at 5064.466 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 5,062,082 + PS417_23385 0.53 -2.1 5,062,082 + PS417_23385 0.53 -1.8 5,062,173 - PS417_23385 0.57 -0.0 5,062,173 - PS417_23385 0.57 -1.6 5,062,211 + PS417_23385 0.59 -1.0 5,062,212 - PS417_23385 0.59 -2.6 5,062,212 - PS417_23385 0.59 -1.3 5,062,447 + PS417_23385 0.71 -0.8 5,062,447 + PS417_23385 0.71 -1.2 5,062,466 + PS417_23385 0.72 -0.8 5,062,466 + PS417_23385 0.72 -0.1 5,062,466 + PS417_23385 0.72 -0.5 5,062,853 + -0.5 5,062,853 + -1.0 5,062,854 - -1.4 5,062,854 - -0.6 5,062,908 - -2.3 5,062,925 + -1.6 5,063,144 + PS417_23390 0.11 -1.5 5,063,145 - PS417_23390 0.11 +1.3 5,063,429 + PS417_23390 0.42 -0.5 5,063,430 - PS417_23390 0.42 -1.3 5,063,496 + PS417_23390 0.49 -0.2 5,063,656 - PS417_23390 0.66 -0.5 5,063,656 - PS417_23390 0.66 +0.0 5,063,657 + PS417_23390 0.66 -1.9 5,063,658 - PS417_23390 0.66 -0.5 5,063,666 + PS417_23390 0.67 -1.8 5,063,666 + PS417_23390 0.67 -1.1 5,063,667 - PS417_23390 0.67 -0.9 5,063,747 + PS417_23390 0.75 -0.2 5,063,748 - PS417_23390 0.75 -1.1 5,063,951 - -1.3 5,064,073 - +0.2 5,064,296 + -0.3 5,064,297 - -0.0 5,064,301 - -0.2 5,064,308 + +1.0 5,064,308 + -0.3 5,064,309 - -0.2 5,064,311 - -0.6 5,064,322 + -1.0 5,064,323 - -0.4 5,064,354 + +0.5 5,064,369 - -1.2 5,064,369 - -0.6 5,064,435 - -0.0 5,064,465 + -0.4 5,064,466 - -1.6
Or see this region's nucleotide sequence