Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23370 and PS417_23375 are separated by 11 nucleotides PS417_23375 and PS417_23380 overlap by 1 nucleotides PS417_23380 and PS417_23385 are separated by 3 nucleotides PS417_23385 and PS417_23390 are separated by 3 nucleotides
PS417_23370: PS417_23370 - protoheme IX farnesyltransferase, at 5,059,146 to 5,060,033
_23370
PS417_23375: PS417_23375 - cytochrome C oxidase, at 5,060,045 to 5,060,386
_23375
PS417_23380: PS417_23380 - cytochrome o ubiquinol oxidase subunit III, at 5,060,386 to 5,061,012
_23380
PS417_23385: PS417_23385 - cytochrome o ubiquinol oxidase subunit I, at 5,061,016 to 5,063,034
_23385
PS417_23390: PS417_23390 - ubiquinol oxidase subunit II, at 5,063,038 to 5,063,979
_23390
Position (kb) 5061
5062
5063
5064 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5060.065 kb on + strand at 5060.184 kb on + strand, within PS417_23375 at 5060.263 kb on - strand, within PS417_23375 at 5060.516 kb on + strand, within PS417_23380 at 5060.516 kb on + strand, within PS417_23380 at 5060.517 kb on - strand, within PS417_23380 at 5060.730 kb on - strand, within PS417_23380 at 5060.861 kb on + strand, within PS417_23380 at 5060.906 kb on + strand, within PS417_23380 at 5061.002 kb on - strand at 5061.485 kb on + strand, within PS417_23385 at 5061.579 kb on + strand, within PS417_23385 at 5061.620 kb on + strand, within PS417_23385 at 5061.720 kb on - strand, within PS417_23385 at 5061.924 kb on - strand, within PS417_23385 at 5061.924 kb on - strand, within PS417_23385 at 5062.082 kb on + strand, within PS417_23385 at 5062.082 kb on + strand, within PS417_23385 at 5062.173 kb on - strand, within PS417_23385 at 5062.173 kb on - strand, within PS417_23385 at 5062.211 kb on + strand, within PS417_23385 at 5062.212 kb on - strand, within PS417_23385 at 5062.212 kb on - strand, within PS417_23385 at 5062.447 kb on + strand, within PS417_23385 at 5062.447 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.466 kb on + strand, within PS417_23385 at 5062.853 kb on + strand at 5062.853 kb on + strand at 5062.854 kb on - strand at 5062.854 kb on - strand at 5062.908 kb on - strand at 5062.925 kb on + strand at 5063.144 kb on + strand, within PS417_23390 at 5063.145 kb on - strand, within PS417_23390 at 5063.429 kb on + strand, within PS417_23390 at 5063.430 kb on - strand, within PS417_23390 at 5063.496 kb on + strand, within PS417_23390 at 5063.656 kb on - strand, within PS417_23390 at 5063.656 kb on - strand, within PS417_23390 at 5063.657 kb on + strand, within PS417_23390 at 5063.658 kb on - strand, within PS417_23390 at 5063.666 kb on + strand, within PS417_23390 at 5063.666 kb on + strand, within PS417_23390 at 5063.667 kb on - strand, within PS417_23390 at 5063.747 kb on + strand, within PS417_23390 at 5063.748 kb on - strand, within PS417_23390 at 5063.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 5,060,065 + +1.5 5,060,184 + PS417_23375 0.41 -1.6 5,060,263 - PS417_23375 0.64 -1.2 5,060,516 + PS417_23380 0.21 +0.4 5,060,516 + PS417_23380 0.21 -1.0 5,060,517 - PS417_23380 0.21 +0.5 5,060,730 - PS417_23380 0.55 -0.6 5,060,861 + PS417_23380 0.76 +2.0 5,060,906 + PS417_23380 0.83 -1.2 5,061,002 - +0.0 5,061,485 + PS417_23385 0.23 -2.3 5,061,579 + PS417_23385 0.28 -1.5 5,061,620 + PS417_23385 0.30 -0.5 5,061,720 - PS417_23385 0.35 -0.5 5,061,924 - PS417_23385 0.45 -1.4 5,061,924 - PS417_23385 0.45 -2.7 5,062,082 + PS417_23385 0.53 -2.1 5,062,082 + PS417_23385 0.53 -1.8 5,062,173 - PS417_23385 0.57 -0.0 5,062,173 - PS417_23385 0.57 -1.6 5,062,211 + PS417_23385 0.59 -1.0 5,062,212 - PS417_23385 0.59 -2.6 5,062,212 - PS417_23385 0.59 -1.3 5,062,447 + PS417_23385 0.71 -0.8 5,062,447 + PS417_23385 0.71 -1.2 5,062,466 + PS417_23385 0.72 -0.8 5,062,466 + PS417_23385 0.72 -0.1 5,062,466 + PS417_23385 0.72 -0.5 5,062,853 + -0.5 5,062,853 + -1.0 5,062,854 - -1.4 5,062,854 - -0.6 5,062,908 - -2.3 5,062,925 + -1.6 5,063,144 + PS417_23390 0.11 -1.5 5,063,145 - PS417_23390 0.11 +1.3 5,063,429 + PS417_23390 0.42 -0.5 5,063,430 - PS417_23390 0.42 -1.3 5,063,496 + PS417_23390 0.49 -0.2 5,063,656 - PS417_23390 0.66 -0.5 5,063,656 - PS417_23390 0.66 +0.0 5,063,657 + PS417_23390 0.66 -1.9 5,063,658 - PS417_23390 0.66 -0.5 5,063,666 + PS417_23390 0.67 -1.8 5,063,666 + PS417_23390 0.67 -1.1 5,063,667 - PS417_23390 0.67 -0.9 5,063,747 + PS417_23390 0.75 -0.2 5,063,748 - PS417_23390 0.75 -1.1 5,063,951 - -1.3
Or see this region's nucleotide sequence