Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22690 and PS417_22695 are separated by 221 nucleotides PS417_22695 and PS417_22700 are separated by 196 nucleotides PS417_22700 and PS417_22705 are separated by 74 nucleotides
PS417_22690: PS417_22690 - phosphogluconate dehydratase, at 4,913,282 to 4,915,108
_22690
PS417_22695: PS417_22695 - glyceraldehyde-3-phosphate dehydrogenase, at 4,915,330 to 4,916,331
_22695
PS417_22700: PS417_22700 - RNA polymerase subunit sigma-24, at 4,916,528 to 4,917,046
_22700
PS417_22705: PS417_22705 - glycerol-3-phosphate ABC transporter substrate-binding protein, at 4,917,121 to 4,918,089
_22705
Position (kb)
4915
4916
4917 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4914.361 kb on - strand at 4914.439 kb on - strand, within PS417_22690 at 4914.466 kb on - strand, within PS417_22690 at 4914.888 kb on + strand, within PS417_22690 at 4914.941 kb on - strand at 4915.112 kb on + strand at 4915.112 kb on + strand at 4915.151 kb on - strand at 4915.393 kb on + strand at 4915.393 kb on + strand at 4915.394 kb on - strand at 4915.394 kb on - strand at 4915.477 kb on + strand, within PS417_22695 at 4915.477 kb on + strand, within PS417_22695 at 4915.478 kb on - strand, within PS417_22695 at 4915.478 kb on - strand, within PS417_22695 at 4915.478 kb on - strand, within PS417_22695 at 4915.487 kb on + strand, within PS417_22695 at 4915.487 kb on + strand, within PS417_22695 at 4915.487 kb on + strand, within PS417_22695 at 4915.488 kb on - strand, within PS417_22695 at 4915.488 kb on - strand, within PS417_22695 at 4915.488 kb on - strand, within PS417_22695 at 4915.488 kb on - strand, within PS417_22695 at 4915.488 kb on - strand, within PS417_22695 at 4915.665 kb on + strand, within PS417_22695 at 4915.665 kb on + strand, within PS417_22695 at 4915.666 kb on - strand, within PS417_22695 at 4915.666 kb on - strand, within PS417_22695 at 4915.733 kb on - strand, within PS417_22695 at 4916.152 kb on + strand, within PS417_22695 at 4916.155 kb on - strand, within PS417_22695 at 4916.155 kb on - strand, within PS417_22695 at 4916.263 kb on + strand at 4916.293 kb on - strand at 4916.293 kb on - strand at 4916.301 kb on + strand at 4916.329 kb on + strand at 4916.330 kb on - strand at 4916.643 kb on - strand, within PS417_22700 at 4916.702 kb on + strand, within PS417_22700 at 4917.008 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.092 kb on + strand at 4917.092 kb on + strand at 4917.326 kb on + strand, within PS417_22705
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 4,914,361 - +0.9 4,914,439 - PS417_22690 0.63 -2.2 4,914,466 - PS417_22690 0.65 -0.1 4,914,888 + PS417_22690 0.88 -3.9 4,914,941 - -1.9 4,915,112 + -0.6 4,915,112 + -1.1 4,915,151 - -2.1 4,915,393 + -2.7 4,915,393 + -1.1 4,915,394 - -0.7 4,915,394 - -0.3 4,915,477 + PS417_22695 0.15 -0.3 4,915,477 + PS417_22695 0.15 -1.4 4,915,478 - PS417_22695 0.15 -0.7 4,915,478 - PS417_22695 0.15 +0.5 4,915,478 - PS417_22695 0.15 -1.0 4,915,487 + PS417_22695 0.16 -0.7 4,915,487 + PS417_22695 0.16 -1.9 4,915,487 + PS417_22695 0.16 -1.5 4,915,488 - PS417_22695 0.16 -1.2 4,915,488 - PS417_22695 0.16 -0.9 4,915,488 - PS417_22695 0.16 +0.7 4,915,488 - PS417_22695 0.16 -2.4 4,915,488 - PS417_22695 0.16 -1.5 4,915,665 + PS417_22695 0.33 -1.0 4,915,665 + PS417_22695 0.33 -1.3 4,915,666 - PS417_22695 0.34 -1.9 4,915,666 - PS417_22695 0.34 -1.4 4,915,733 - PS417_22695 0.40 -0.9 4,916,152 + PS417_22695 0.82 -0.9 4,916,155 - PS417_22695 0.82 -0.7 4,916,155 - PS417_22695 0.82 -1.3 4,916,263 + -1.1 4,916,293 - +0.8 4,916,293 - -0.7 4,916,301 + -0.9 4,916,329 + -2.6 4,916,330 - -0.2 4,916,643 - PS417_22700 0.22 -0.0 4,916,702 + PS417_22700 0.34 +0.2 4,917,008 - +0.9 4,917,016 - +0.0 4,917,016 - -0.8 4,917,016 - +0.1 4,917,016 - +0.3 4,917,016 - -0.1 4,917,092 + -2.1 4,917,092 + +0.2 4,917,326 + PS417_22705 0.21 -0.6
Or see this region's nucleotide sequence