Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22200 and PS417_22205 are separated by 155 nucleotides PS417_22205 and PS417_22210 overlap by 44 nucleotides
PS417_22200: PS417_22200 - hypothetical protein, at 4,809,252 to 4,813,466
_22200
PS417_22205: PS417_22205 - potassium transporter TrkH, at 4,813,622 to 4,815,076
_22205
PS417_22210: PS417_22210 - AraC family transcriptional regulator, at 4,815,033 to 4,816,091
_22210
Position (kb)
4813
4814
4815
4816 Strain fitness (log2 ratio)
-2
-1
0
1 at 4812.771 kb on + strand, within PS417_22200 at 4812.779 kb on - strand, within PS417_22200 at 4813.007 kb on - strand, within PS417_22200 at 4813.491 kb on - strand at 4813.530 kb on + strand at 4813.530 kb on + strand at 4813.535 kb on - strand at 4813.535 kb on - strand at 4813.566 kb on + strand at 4813.566 kb on + strand at 4813.567 kb on - strand at 4813.642 kb on + strand at 4813.643 kb on - strand at 4813.841 kb on + strand, within PS417_22205 at 4813.841 kb on + strand, within PS417_22205 at 4813.841 kb on + strand, within PS417_22205 at 4813.842 kb on - strand, within PS417_22205 at 4813.876 kb on + strand, within PS417_22205 at 4813.877 kb on - strand, within PS417_22205 at 4813.877 kb on - strand, within PS417_22205 at 4813.919 kb on + strand, within PS417_22205 at 4813.919 kb on + strand, within PS417_22205 at 4813.920 kb on - strand, within PS417_22205 at 4813.969 kb on + strand, within PS417_22205 at 4814.387 kb on + strand, within PS417_22205 at 4814.388 kb on - strand, within PS417_22205 at 4814.591 kb on + strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4814.703 kb on - strand, within PS417_22205 at 4815.425 kb on - strand, within PS417_22210 at 4815.425 kb on - strand, within PS417_22210 at 4815.521 kb on - strand, within PS417_22210 at 4815.709 kb on - strand, within PS417_22210 at 4815.728 kb on - strand, within PS417_22210
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 4,812,771 + PS417_22200 0.83 +1.3 4,812,779 - PS417_22200 0.84 +0.4 4,813,007 - PS417_22200 0.89 +0.0 4,813,491 - +0.9 4,813,530 + +0.2 4,813,530 + -1.3 4,813,535 - -1.1 4,813,535 - -0.3 4,813,566 + +0.1 4,813,566 + -0.4 4,813,567 - +0.3 4,813,642 + -0.5 4,813,643 - -0.3 4,813,841 + PS417_22205 0.15 -0.7 4,813,841 + PS417_22205 0.15 -1.0 4,813,841 + PS417_22205 0.15 +0.4 4,813,842 - PS417_22205 0.15 -0.3 4,813,876 + PS417_22205 0.17 -1.1 4,813,877 - PS417_22205 0.18 -0.8 4,813,877 - PS417_22205 0.18 -0.2 4,813,919 + PS417_22205 0.20 -0.0 4,813,919 + PS417_22205 0.20 +0.2 4,813,920 - PS417_22205 0.20 -1.2 4,813,969 + PS417_22205 0.24 -0.2 4,814,387 + PS417_22205 0.53 +0.1 4,814,388 - PS417_22205 0.53 -1.7 4,814,591 + PS417_22205 0.67 -0.8 4,814,703 - PS417_22205 0.74 -0.7 4,814,703 - PS417_22205 0.74 -0.4 4,814,703 - PS417_22205 0.74 -0.5 4,814,703 - PS417_22205 0.74 -1.0 4,814,703 - PS417_22205 0.74 -0.6 4,815,425 - PS417_22210 0.37 +0.6 4,815,425 - PS417_22210 0.37 -1.9 4,815,521 - PS417_22210 0.46 -0.6 4,815,709 - PS417_22210 0.64 -1.1 4,815,728 - PS417_22210 0.66 +0.2
Or see this region's nucleotide sequence