Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21945 and PS417_21950 overlap by 4 nucleotides PS417_21950 and PS417_21955 are separated by 34 nucleotides PS417_21955 and PS417_21960 are separated by 42 nucleotides PS417_21960 and PS417_21965 are separated by 146 nucleotides
PS417_21945: PS417_21945 - RNA polymerase subunit sigma-24, at 4,760,733 to 4,761,956
_21945
PS417_21950: PS417_21950 - polyketide cyclase, at 4,761,953 to 4,762,429
_21950
PS417_21955: PS417_21955 - dehydrogenase, at 4,762,464 to 4,762,808
_21955
PS417_21960: PS417_21960 - ketosteroid isomerase, at 4,762,851 to 4,763,270
_21960
PS417_21965: PS417_21965 - GNAT family acetyltransferase, at 4,763,417 to 4,763,935
_21965
Position (kb) 4762
4763 Strain fitness (log2 ratio) -1
0
1
2 at 4761.588 kb on + strand, within PS417_21945 at 4761.589 kb on - strand, within PS417_21945 at 4761.589 kb on - strand, within PS417_21945 at 4762.080 kb on + strand, within PS417_21950 at 4762.424 kb on - strand at 4762.451 kb on - strand at 4762.451 kb on - strand at 4762.451 kb on - strand at 4762.573 kb on + strand, within PS417_21955 at 4762.573 kb on + strand, within PS417_21955 at 4762.723 kb on + strand, within PS417_21955 at 4762.801 kb on + strand at 4762.801 kb on + strand at 4762.838 kb on + strand at 4762.838 kb on + strand at 4762.839 kb on - strand at 4762.839 kb on - strand at 4763.395 kb on + strand at 4763.395 kb on + strand at 4763.396 kb on - strand at 4763.396 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 4,761,588 + PS417_21945 0.70 -0.1 4,761,589 - PS417_21945 0.70 -0.0 4,761,589 - PS417_21945 0.70 -0.2 4,762,080 + PS417_21950 0.27 +2.4 4,762,424 - -0.2 4,762,451 - +0.0 4,762,451 - +0.1 4,762,451 - +0.2 4,762,573 + PS417_21955 0.32 +0.1 4,762,573 + PS417_21955 0.32 -1.2 4,762,723 + PS417_21955 0.75 -1.0 4,762,801 + +0.7 4,762,801 + +0.4 4,762,838 + -1.0 4,762,838 + +0.7 4,762,839 - +0.4 4,762,839 - +0.2 4,763,395 + +0.3 4,763,395 + -0.7 4,763,396 - +0.1 4,763,396 - -0.0
Or see this region's nucleotide sequence