Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21505 and PS417_21510 are separated by 136 nucleotides PS417_21510 and PS417_21515 overlap by 4 nucleotides PS417_21515 and PS417_21520 are separated by 18 nucleotides
PS417_21505: PS417_21505 - AraC family transcriptional regulator, at 4,669,835 to 4,670,833
_21505
PS417_21510: PS417_21510 - histidine kinase, at 4,670,970 to 4,672,316
_21510
PS417_21515: PS417_21515 - transcriptional regulator, at 4,672,313 to 4,672,990
_21515
PS417_21520: PS417_21520 - membrane protein, at 4,673,009 to 4,673,317
_21520
Position (kb)
4670
4671
4672
4673 Strain fitness (log2 ratio)
-2
-1
0
1 at 4670.030 kb on + strand, within PS417_21505 at 4670.031 kb on - strand, within PS417_21505 at 4670.133 kb on + strand, within PS417_21505 at 4670.136 kb on + strand, within PS417_21505 at 4670.136 kb on + strand, within PS417_21505 at 4670.137 kb on - strand, within PS417_21505 at 4670.141 kb on + strand, within PS417_21505 at 4670.149 kb on - strand, within PS417_21505 at 4670.357 kb on + strand, within PS417_21505 at 4670.538 kb on + strand at 4670.697 kb on - strand, within PS417_21505 at 4670.839 kb on + strand at 4670.895 kb on + strand at 4671.813 kb on + strand, within PS417_21510 at 4672.003 kb on + strand, within PS417_21510 at 4672.067 kb on + strand, within PS417_21510 at 4672.068 kb on - strand, within PS417_21510 at 4672.339 kb on - strand at 4672.513 kb on - strand, within PS417_21515 at 4672.513 kb on - strand, within PS417_21515 at 4672.533 kb on + strand, within PS417_21515 at 4672.533 kb on + strand at 4672.698 kb on + strand, within PS417_21515 at 4672.698 kb on + strand, within PS417_21515 at 4672.698 kb on + strand, within PS417_21515 at 4672.698 kb on + strand, within PS417_21515 at 4672.698 kb on + strand, within PS417_21515 at 4672.698 kb on + strand, within PS417_21515 at 4672.698 kb on + strand, within PS417_21515 at 4672.699 kb on - strand, within PS417_21515 at 4672.699 kb on - strand, within PS417_21515 at 4672.699 kb on - strand, within PS417_21515 at 4672.699 kb on - strand, within PS417_21515 at 4672.699 kb on - strand, within PS417_21515 at 4672.699 kb on - strand, within PS417_21515 at 4672.879 kb on - strand, within PS417_21515
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 4,670,030 + PS417_21505 0.20 +0.2 4,670,031 - PS417_21505 0.20 +0.4 4,670,133 + PS417_21505 0.30 -0.1 4,670,136 + PS417_21505 0.30 +0.2 4,670,136 + PS417_21505 0.30 -0.6 4,670,137 - PS417_21505 0.30 -0.3 4,670,141 + PS417_21505 0.31 +0.2 4,670,149 - PS417_21505 0.31 -0.5 4,670,357 + PS417_21505 0.52 -1.1 4,670,538 + +0.8 4,670,697 - PS417_21505 0.86 +0.5 4,670,839 + -0.1 4,670,895 + +0.1 4,671,813 + PS417_21510 0.63 -1.4 4,672,003 + PS417_21510 0.77 -2.2 4,672,067 + PS417_21510 0.81 +0.1 4,672,068 - PS417_21510 0.82 +0.4 4,672,339 - -0.3 4,672,513 - PS417_21515 0.29 -1.1 4,672,513 - PS417_21515 0.29 -1.1 4,672,533 + PS417_21515 0.32 +0.6 4,672,533 + +1.4 4,672,698 + PS417_21515 0.57 -1.2 4,672,698 + PS417_21515 0.57 +0.4 4,672,698 + PS417_21515 0.57 -0.2 4,672,698 + PS417_21515 0.57 +1.2 4,672,698 + PS417_21515 0.57 -0.4 4,672,698 + PS417_21515 0.57 -0.6 4,672,698 + PS417_21515 0.57 -0.4 4,672,699 - PS417_21515 0.57 -0.6 4,672,699 - PS417_21515 0.57 -0.5 4,672,699 - PS417_21515 0.57 -0.7 4,672,699 - PS417_21515 0.57 -0.8 4,672,699 - PS417_21515 0.57 -0.6 4,672,699 - PS417_21515 0.57 -2.0 4,672,879 - PS417_21515 0.83 +0.2
Or see this region's nucleotide sequence