Strain Fitness in Pseudomonas simiae WCS417 around PS417_21490
Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.06 vol% |
---|---|---|---|---|---|
remove | |||||
4,666,329 | + | -0.8 | |||
4,666,346 | + | -0.4 | |||
4,666,513 | + | PS417_21490 | 0.11 | -0.4 | |
4,666,513 | + | PS417_21490 | 0.11 | -0.0 | |
4,666,513 | + | PS417_21490 | 0.11 | -1.2 | |
4,666,514 | - | PS417_21490 | 0.11 | -1.8 | |
4,666,514 | - | PS417_21490 | 0.11 | -1.0 | |
4,666,606 | - | PS417_21490 | 0.26 | -0.1 | |
4,666,626 | - | PS417_21490 | 0.30 | +1.6 | |
4,666,773 | + | PS417_21490 | 0.55 | -0.4 | |
4,666,773 | + | PS417_21490 | 0.55 | -0.7 | |
4,666,774 | - | PS417_21490 | 0.55 | -0.1 | |
4,666,945 | + | PS417_21490 | 0.84 | -1.1 | |
4,666,946 | - | PS417_21490 | 0.84 | -0.8 | |
4,667,263 | + | PS417_21495 | 0.23 | +0.8 | |
4,667,492 | - | PS417_21495 | 0.46 | -1.1 | |
4,667,492 | - | PS417_21495 | 0.46 | -0.9 | |
4,667,542 | + | PS417_21495 | 0.51 | -0.4 | |
4,667,542 | + | PS417_21495 | 0.51 | -0.4 | |
4,667,543 | - | PS417_21495 | 0.51 | +0.0 | |
4,667,951 | - | -1.3 | |||
4,668,025 | + | -0.8 | |||
4,668,025 | + | -0.8 | |||
4,668,026 | - | -0.6 | |||
4,668,026 | - | +0.1 | |||
4,668,026 | - | -0.7 | |||
4,668,026 | - | -1.8 |
Or see this region's nucleotide sequence