Strain Fitness in Pseudomonas simiae WCS417 around PS417_16490
Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.06 vol% |
---|---|---|---|---|---|
remove | |||||
3,600,623 | + | +0.3 | |||
3,600,624 | - | +0.1 | |||
3,600,708 | + | -0.3 | |||
3,601,573 | - | -0.6 | |||
3,602,171 | - | PS417_16490 | 0.33 | -0.2 | |
3,602,876 | - | PS417_16490 | 0.62 | -0.9 | |
3,603,847 | - | -0.6 | |||
3,603,954 | - | +0.2 | |||
3,604,003 | - | +1.3 | |||
3,604,065 | - | +0.2 | |||
3,604,172 | + | -0.9 | |||
3,604,225 | - | -0.4 | |||
3,604,225 | - | +1.4 | |||
3,604,304 | - | +0.1 | |||
3,604,403 | - | PS417_16495 | 0.17 | -0.1 | |
3,604,545 | + | PS417_16495 | 0.37 | -0.9 | |
3,604,609 | - | PS417_16495 | 0.47 | -0.7 | |
3,604,638 | - | PS417_16495 | 0.51 | +0.7 | |
3,604,725 | + | PS417_16495 | 0.64 | -0.2 | |
3,604,725 | + | PS417_16495 | 0.64 | -0.3 |
Or see this region's nucleotide sequence