Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01605 and PS417_01610 are separated by 151 nucleotides PS417_01610 and PS417_01615 are separated by 1 nucleotides PS417_01615 and PS417_01620 are separated by 41 nucleotides PS417_01620 and PS417_01625 are separated by 119 nucleotides PS417_01625 and PS417_01630 overlap by 2 nucleotides
PS417_01605: PS417_01605 - phosphoglycerate mutase, at 353,754 to 355,280
_01605
PS417_01610: PS417_01610 - sulfurtransferase, at 355,432 to 355,845
_01610
PS417_01615: PS417_01615 - glutaredoxin, at 355,847 to 356,101
_01615
PS417_01620: PS417_01620 - preprotein translocase subunit SecB, at 356,143 to 356,622
_01620
PS417_01625: PS417_01625 - rRNA methylase, at 356,742 to 357,197
_01625
PS417_01630: PS417_01630 - hypothetical protein, at 357,196 to 357,636
_01630
Position (kb) 356
357 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 355.281 kb on - strand at 355.281 kb on - strand at 355.281 kb on - strand at 355.281 kb on - strand at 355.301 kb on + strand at 355.394 kb on + strand at 355.394 kb on + strand at 355.396 kb on + strand at 355.396 kb on + strand at 355.396 kb on + strand at 355.846 kb on + strand at 355.846 kb on + strand at 356.107 kb on - strand at 356.113 kb on + strand at 356.209 kb on + strand, within PS417_01620 at 356.209 kb on + strand, within PS417_01620 at 356.407 kb on - strand, within PS417_01620 at 356.620 kb on + strand at 356.620 kb on + strand at 356.681 kb on + strand at 356.681 kb on + strand at 356.681 kb on + strand at 356.681 kb on + strand at 356.681 kb on + strand at 356.681 kb on + strand at 356.681 kb on + strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.682 kb on - strand at 356.735 kb on + strand at 356.743 kb on + strand at 356.868 kb on + strand, within PS417_01625 at 357.261 kb on + strand, within PS417_01630 at 357.262 kb on - strand, within PS417_01630
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 355,281 - -0.9 355,281 - -0.2 355,281 - -1.2 355,281 - -0.9 355,301 + -3.1 355,394 + -0.2 355,394 + -0.4 355,396 + -0.2 355,396 + -0.5 355,396 + -1.8 355,846 + -0.2 355,846 + -0.0 356,107 - -0.7 356,113 + +0.1 356,209 + PS417_01620 0.14 -1.7 356,209 + PS417_01620 0.14 -0.4 356,407 - PS417_01620 0.55 +0.4 356,620 + +0.1 356,620 + -0.2 356,681 + +0.4 356,681 + -0.2 356,681 + +1.1 356,681 + +0.6 356,681 + +0.1 356,681 + -0.1 356,681 + -0.1 356,682 - -0.4 356,682 - -2.7 356,682 - +0.5 356,682 - +0.8 356,682 - -0.0 356,682 - +2.6 356,682 - +0.1 356,682 - -0.8 356,682 - -0.3 356,735 + +1.1 356,743 + -1.1 356,868 + PS417_01625 0.28 +1.1 357,261 + PS417_01630 0.15 +0.3 357,262 - PS417_01630 0.15 -0.4
Or see this region's nucleotide sequence