Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15555 and PS417_15560 are separated by 177 nucleotides PS417_15560 and PS417_15565 are separated by 175 nucleotides
PS417_15555: PS417_15555 - hypothetical protein, at 3,406,209 to 3,407,585
_15555
PS417_15560: PS417_15560 - hypothetical protein, at 3,407,763 to 3,407,987
_15560
PS417_15565: PS417_15565 - transketolase, at 3,408,163 to 3,410,220
_15565
Position (kb)
3407
3408 Strain fitness (log2 ratio)
-1
0
1 at 3407.197 kb on - strand, within PS417_15555 at 3407.271 kb on + strand, within PS417_15555 at 3407.271 kb on + strand, within PS417_15555 at 3407.272 kb on - strand, within PS417_15555 at 3407.385 kb on + strand, within PS417_15555 at 3407.552 kb on + strand at 3407.664 kb on + strand at 3407.708 kb on + strand at 3407.708 kb on + strand at 3407.708 kb on + strand at 3407.709 kb on - strand at 3407.709 kb on - strand at 3407.870 kb on + strand, within PS417_15560 at 3407.870 kb on + strand, within PS417_15560 at 3407.871 kb on - strand at 3408.031 kb on + strand at 3408.031 kb on + strand at 3408.134 kb on + strand at 3408.134 kb on + strand at 3408.135 kb on - strand at 3408.135 kb on - strand at 3408.139 kb on - strand at 3408.183 kb on + strand at 3408.291 kb on + strand at 3408.291 kb on + strand at 3408.291 kb on + strand at 3408.292 kb on - strand at 3408.292 kb on - strand at 3408.292 kb on - strand at 3408.292 kb on - strand at 3408.292 kb on - strand at 3408.292 kb on - strand at 3408.655 kb on + strand, within PS417_15565 at 3408.655 kb on + strand, within PS417_15565 at 3408.664 kb on + strand, within PS417_15565 at 3408.665 kb on - strand, within PS417_15565 at 3408.665 kb on - strand, within PS417_15565 at 3408.665 kb on - strand, within PS417_15565 at 3408.665 kb on - strand, within PS417_15565 at 3408.760 kb on + strand, within PS417_15565 at 3408.760 kb on + strand, within PS417_15565 at 3408.761 kb on - strand, within PS417_15565 at 3408.761 kb on - strand, within PS417_15565 at 3408.839 kb on - strand, within PS417_15565
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 3,407,197 - PS417_15555 0.72 +0.2 3,407,271 + PS417_15555 0.77 -0.4 3,407,271 + PS417_15555 0.77 -0.2 3,407,272 - PS417_15555 0.77 -0.1 3,407,385 + PS417_15555 0.85 -0.0 3,407,552 + +0.4 3,407,664 + -1.6 3,407,708 + -0.2 3,407,708 + -0.5 3,407,708 + +0.1 3,407,709 - +0.1 3,407,709 - +1.4 3,407,870 + PS417_15560 0.48 -0.7 3,407,870 + PS417_15560 0.48 -0.5 3,407,871 - +1.4 3,408,031 + -0.6 3,408,031 + +0.4 3,408,134 + -0.6 3,408,134 + +0.2 3,408,135 - -0.0 3,408,135 - +0.7 3,408,139 - +0.0 3,408,183 + +0.1 3,408,291 + +0.3 3,408,291 + -0.3 3,408,291 + +0.8 3,408,292 - +0.9 3,408,292 - +0.2 3,408,292 - -0.2 3,408,292 - -0.1 3,408,292 - -0.2 3,408,292 - +1.2 3,408,655 + PS417_15565 0.24 +0.6 3,408,655 + PS417_15565 0.24 +0.1 3,408,664 + PS417_15565 0.24 +0.1 3,408,665 - PS417_15565 0.24 -0.5 3,408,665 - PS417_15565 0.24 -0.1 3,408,665 - PS417_15565 0.24 +0.4 3,408,665 - PS417_15565 0.24 +0.6 3,408,760 + PS417_15565 0.29 -0.3 3,408,760 + PS417_15565 0.29 -0.0 3,408,761 - PS417_15565 0.29 -0.3 3,408,761 - PS417_15565 0.29 -1.4 3,408,839 - PS417_15565 0.33 +0.2
Or see this region's nucleotide sequence