Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15170 and PS417_15175 are separated by 31 nucleotides PS417_15175 and PS417_15180 overlap by 4 nucleotides PS417_15180 and PS417_15185 are separated by 3 nucleotides
PS417_15170: PS417_15170 - long-chain fatty acid--CoA ligase, at 3,323,808 to 3,325,511
_15170
PS417_15175: PS417_15175 - acetyl-CoA acetyltransferase, at 3,325,543 to 3,326,841
_15175
PS417_15180: PS417_15180 - acyl dehydratase, at 3,326,838 to 3,327,728
_15180
PS417_15185: PS417_15185 - 3-ketoacyl-ACP reductase, at 3,327,732 to 3,329,075
_15185
Position (kb)
3325
3326
3327 Strain fitness (log2 ratio)
-1
0
1 at 3324.794 kb on + strand, within PS417_15170 at 3324.795 kb on - strand, within PS417_15170 at 3324.847 kb on + strand, within PS417_15170 at 3324.847 kb on + strand, within PS417_15170 at 3324.848 kb on - strand, within PS417_15170 at 3324.848 kb on - strand, within PS417_15170 at 3325.014 kb on - strand, within PS417_15170 at 3325.238 kb on + strand, within PS417_15170 at 3325.330 kb on + strand at 3325.357 kb on + strand at 3325.357 kb on + strand at 3325.500 kb on + strand at 3325.501 kb on - strand at 3325.501 kb on - strand at 3326.690 kb on + strand, within PS417_15175 at 3326.691 kb on - strand, within PS417_15175 at 3326.750 kb on + strand at 3327.189 kb on - strand, within PS417_15180 at 3327.192 kb on + strand, within PS417_15180 at 3327.192 kb on + strand, within PS417_15180 at 3327.193 kb on - strand, within PS417_15180 at 3327.193 kb on - strand, within PS417_15180 at 3327.193 kb on - strand, within PS417_15180 at 3327.368 kb on - strand, within PS417_15180 at 3327.368 kb on - strand at 3327.515 kb on - strand, within PS417_15180 at 3327.721 kb on + strand at 3327.721 kb on + strand at 3327.722 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 3,324,794 + PS417_15170 0.58 +0.4 3,324,795 - PS417_15170 0.58 -0.4 3,324,847 + PS417_15170 0.61 -0.2 3,324,847 + PS417_15170 0.61 +0.3 3,324,848 - PS417_15170 0.61 -0.2 3,324,848 - PS417_15170 0.61 -0.4 3,325,014 - PS417_15170 0.71 +0.1 3,325,238 + PS417_15170 0.84 +0.0 3,325,330 + +0.3 3,325,357 + +0.3 3,325,357 + -0.3 3,325,500 + -0.6 3,325,501 - -0.6 3,325,501 - +0.9 3,326,690 + PS417_15175 0.88 +0.5 3,326,691 - PS417_15175 0.88 -0.4 3,326,750 + +0.3 3,327,189 - PS417_15180 0.39 +0.3 3,327,192 + PS417_15180 0.40 -0.7 3,327,192 + PS417_15180 0.40 -0.7 3,327,193 - PS417_15180 0.40 -0.1 3,327,193 - PS417_15180 0.40 +0.1 3,327,193 - PS417_15180 0.40 -0.5 3,327,368 - PS417_15180 0.59 +0.1 3,327,368 - +0.8 3,327,515 - PS417_15180 0.76 +0.7 3,327,721 + +0.6 3,327,721 + -1.2 3,327,722 - +0.5
Or see this region's nucleotide sequence