Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13370 and PS417_13375 are separated by 488 nucleotides PS417_13375 and PS417_13380 are separated by 247 nucleotides
PS417_13370: PS417_13370 - short-chain dehydrogenase, at 2,938,509 to 2,939,342
_13370
PS417_13375: PS417_13375 - LysR family transcriptional regulator, at 2,939,831 to 2,940,745
_13375
PS417_13380: PS417_13380 - alcohol dehydrogenase, at 2,940,993 to 2,942,015
_13380
Position (kb)
2939
2940
2941 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2938.856 kb on + strand, within PS417_13370 at 2938.894 kb on + strand, within PS417_13370 at 2938.897 kb on + strand, within PS417_13370 at 2938.897 kb on + strand, within PS417_13370 at 2938.898 kb on - strand, within PS417_13370 at 2938.905 kb on - strand, within PS417_13370 at 2938.919 kb on + strand, within PS417_13370 at 2938.920 kb on - strand, within PS417_13370 at 2938.921 kb on + strand, within PS417_13370 at 2938.922 kb on - strand, within PS417_13370 at 2938.922 kb on - strand, within PS417_13370 at 2938.922 kb on - strand, within PS417_13370 at 2938.922 kb on - strand, within PS417_13370 at 2938.941 kb on - strand, within PS417_13370 at 2938.950 kb on - strand, within PS417_13370 at 2938.950 kb on - strand, within PS417_13370 at 2939.013 kb on + strand, within PS417_13370 at 2939.013 kb on + strand, within PS417_13370 at 2939.013 kb on + strand, within PS417_13370 at 2939.116 kb on + strand, within PS417_13370 at 2939.304 kb on - strand at 2939.359 kb on + strand at 2939.360 kb on - strand at 2939.361 kb on + strand at 2939.361 kb on + strand at 2939.362 kb on - strand at 2939.362 kb on - strand at 2939.363 kb on + strand at 2939.363 kb on + strand at 2939.363 kb on + strand at 2939.363 kb on + strand at 2939.364 kb on - strand at 2939.364 kb on - strand at 2939.364 kb on - strand at 2939.364 kb on - strand at 2939.374 kb on + strand at 2939.380 kb on - strand at 2939.402 kb on + strand at 2939.403 kb on - strand at 2939.419 kb on + strand at 2939.420 kb on - strand at 2939.420 kb on - strand at 2939.436 kb on - strand at 2939.509 kb on - strand at 2939.509 kb on - strand at 2939.513 kb on - strand at 2939.682 kb on + strand at 2939.701 kb on + strand at 2939.701 kb on + strand at 2939.809 kb on + strand at 2939.923 kb on + strand, within PS417_13375 at 2939.924 kb on - strand, within PS417_13375 at 2939.924 kb on - strand, within PS417_13375 at 2939.924 kb on - strand, within PS417_13375 at 2940.080 kb on + strand, within PS417_13375 at 2940.080 kb on + strand, within PS417_13375 at 2940.080 kb on + strand, within PS417_13375 at 2940.080 kb on + strand, within PS417_13375 at 2940.080 kb on + strand, within PS417_13375 at 2940.081 kb on - strand, within PS417_13375 at 2940.280 kb on - strand, within PS417_13375 at 2940.333 kb on + strand, within PS417_13375 at 2940.334 kb on - strand, within PS417_13375 at 2940.334 kb on - strand, within PS417_13375 at 2940.347 kb on + strand, within PS417_13375 at 2940.348 kb on - strand, within PS417_13375 at 2940.348 kb on - strand, within PS417_13375 at 2940.351 kb on - strand, within PS417_13375 at 2940.499 kb on + strand, within PS417_13375 at 2940.499 kb on + strand, within PS417_13375 at 2940.500 kb on - strand, within PS417_13375 at 2940.698 kb on + strand at 2940.713 kb on - strand at 2940.788 kb on + strand at 2940.788 kb on + strand at 2940.789 kb on - strand at 2940.789 kb on - strand at 2940.792 kb on + strand at 2940.792 kb on + strand at 2940.793 kb on - strand at 2940.845 kb on + strand at 2940.916 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 2,938,856 + PS417_13370 0.42 -0.4 2,938,894 + PS417_13370 0.46 -0.1 2,938,897 + PS417_13370 0.47 +0.3 2,938,897 + PS417_13370 0.47 +0.6 2,938,898 - PS417_13370 0.47 -0.0 2,938,905 - PS417_13370 0.47 +0.5 2,938,919 + PS417_13370 0.49 +0.2 2,938,920 - PS417_13370 0.49 -0.1 2,938,921 + PS417_13370 0.49 -1.1 2,938,922 - PS417_13370 0.50 -1.3 2,938,922 - PS417_13370 0.50 -0.3 2,938,922 - PS417_13370 0.50 -0.0 2,938,922 - PS417_13370 0.50 +1.7 2,938,941 - PS417_13370 0.52 -0.4 2,938,950 - PS417_13370 0.53 -0.0 2,938,950 - PS417_13370 0.53 -0.3 2,939,013 + PS417_13370 0.60 +0.1 2,939,013 + PS417_13370 0.60 +0.3 2,939,013 + PS417_13370 0.60 -0.2 2,939,116 + PS417_13370 0.73 -0.0 2,939,304 - -0.7 2,939,359 + -1.4 2,939,360 - +0.1 2,939,361 + -0.4 2,939,361 + -0.2 2,939,362 - -0.2 2,939,362 - -0.2 2,939,363 + -1.3 2,939,363 + +0.1 2,939,363 + -0.0 2,939,363 + -0.1 2,939,364 - -0.2 2,939,364 - +0.6 2,939,364 - +0.1 2,939,364 - +0.3 2,939,374 + +0.5 2,939,380 - -0.2 2,939,402 + +0.5 2,939,403 - -0.4 2,939,419 + -1.9 2,939,420 - -0.1 2,939,420 - -0.3 2,939,436 - +0.8 2,939,509 - -1.3 2,939,509 - +0.4 2,939,513 - -1.1 2,939,682 + -0.1 2,939,701 + +0.3 2,939,701 + +0.1 2,939,809 + -0.1 2,939,923 + PS417_13375 0.10 +1.6 2,939,924 - PS417_13375 0.10 +1.5 2,939,924 - PS417_13375 0.10 +1.3 2,939,924 - PS417_13375 0.10 +1.8 2,940,080 + PS417_13375 0.27 +2.1 2,940,080 + PS417_13375 0.27 +1.3 2,940,080 + PS417_13375 0.27 +2.6 2,940,080 + PS417_13375 0.27 +0.8 2,940,080 + PS417_13375 0.27 +1.9 2,940,081 - PS417_13375 0.27 +0.1 2,940,280 - PS417_13375 0.49 +2.0 2,940,333 + PS417_13375 0.55 +1.0 2,940,334 - PS417_13375 0.55 +1.4 2,940,334 - PS417_13375 0.55 +2.6 2,940,347 + PS417_13375 0.56 +1.4 2,940,348 - PS417_13375 0.57 +1.4 2,940,348 - PS417_13375 0.57 +1.4 2,940,351 - PS417_13375 0.57 +1.3 2,940,499 + PS417_13375 0.73 +2.0 2,940,499 + PS417_13375 0.73 +2.0 2,940,500 - PS417_13375 0.73 +1.0 2,940,698 + +1.6 2,940,713 - +1.1 2,940,788 + +2.1 2,940,788 + +2.6 2,940,789 - +0.3 2,940,789 - +0.5 2,940,792 + +1.6 2,940,792 + +1.2 2,940,793 - -0.2 2,940,845 + +1.2 2,940,916 + +0.8
Or see this region's nucleotide sequence