Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12170 and PS417_12175 overlap by 1 nucleotides PS417_12175 and PS417_12180 overlap by 1 nucleotides
PS417_12170: PS417_12170 - ABC transporter permease, at 2,643,359 to 2,644,381
_12170
PS417_12175: PS417_12175 - peptide ABC transporter permease, at 2,644,381 to 2,645,442
_12175
PS417_12180: PS417_12180 - ABC transporter substrate-binding protein, at 2,645,442 to 2,647,301
_12180
Position (kb)
2644
2645
2646 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2643.679 kb on - strand at 2643.880 kb on - strand, within PS417_12170 at 2643.921 kb on - strand, within PS417_12170 at 2644.060 kb on - strand, within PS417_12170 at 2644.138 kb on - strand at 2644.138 kb on - strand, within PS417_12170 at 2644.138 kb on - strand, within PS417_12170 at 2644.194 kb on + strand at 2644.205 kb on + strand, within PS417_12170 at 2644.216 kb on - strand, within PS417_12170 at 2644.427 kb on + strand at 2644.591 kb on + strand, within PS417_12175 at 2644.648 kb on + strand, within PS417_12175 at 2644.658 kb on + strand, within PS417_12175 at 2644.659 kb on - strand, within PS417_12175 at 2645.040 kb on - strand, within PS417_12175 at 2645.154 kb on - strand, within PS417_12175 at 2645.605 kb on + strand at 2645.605 kb on + strand at 2645.605 kb on + strand at 2645.606 kb on - strand at 2645.623 kb on + strand at 2645.624 kb on - strand at 2645.624 kb on - strand at 2645.624 kb on - strand at 2645.741 kb on - strand, within PS417_12180 at 2645.741 kb on - strand, within PS417_12180 at 2645.782 kb on + strand, within PS417_12180 at 2645.782 kb on + strand, within PS417_12180 at 2645.782 kb on + strand, within PS417_12180 at 2645.789 kb on - strand, within PS417_12180 at 2645.869 kb on + strand, within PS417_12180 at 2645.869 kb on + strand, within PS417_12180 at 2645.870 kb on - strand, within PS417_12180 at 2645.870 kb on - strand, within PS417_12180 at 2645.932 kb on + strand, within PS417_12180 at 2646.239 kb on - strand, within PS417_12180 at 2646.239 kb on - strand, within PS417_12180 at 2646.239 kb on - strand, within PS417_12180 at 2646.242 kb on + strand, within PS417_12180 at 2646.243 kb on - strand, within PS417_12180 at 2646.243 kb on - strand, within PS417_12180 at 2646.243 kb on - strand, within PS417_12180 at 2646.346 kb on + strand, within PS417_12180
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 2,643,679 - -0.0 2,643,880 - PS417_12170 0.51 +0.2 2,643,921 - PS417_12170 0.55 -0.0 2,644,060 - PS417_12170 0.69 +0.3 2,644,138 - -1.9 2,644,138 - PS417_12170 0.76 -0.1 2,644,138 - PS417_12170 0.76 -0.1 2,644,194 + +1.4 2,644,205 + PS417_12170 0.83 +0.1 2,644,216 - PS417_12170 0.84 -0.9 2,644,427 + -0.3 2,644,591 + PS417_12175 0.20 -0.2 2,644,648 + PS417_12175 0.25 -1.0 2,644,658 + PS417_12175 0.26 +0.5 2,644,659 - PS417_12175 0.26 +0.4 2,645,040 - PS417_12175 0.62 -1.4 2,645,154 - PS417_12175 0.73 -1.1 2,645,605 + +0.4 2,645,605 + -0.1 2,645,605 + +0.3 2,645,606 - -1.0 2,645,623 + -0.9 2,645,624 - -0.2 2,645,624 - +0.0 2,645,624 - +1.1 2,645,741 - PS417_12180 0.16 +0.6 2,645,741 - PS417_12180 0.16 -0.1 2,645,782 + PS417_12180 0.18 -0.8 2,645,782 + PS417_12180 0.18 +1.0 2,645,782 + PS417_12180 0.18 -0.8 2,645,789 - PS417_12180 0.19 -0.4 2,645,869 + PS417_12180 0.23 +0.2 2,645,869 + PS417_12180 0.23 +0.1 2,645,870 - PS417_12180 0.23 -0.1 2,645,870 - PS417_12180 0.23 +1.9 2,645,932 + PS417_12180 0.26 -0.0 2,646,239 - PS417_12180 0.43 +0.5 2,646,239 - PS417_12180 0.43 -0.0 2,646,239 - PS417_12180 0.43 +0.3 2,646,242 + PS417_12180 0.43 +0.3 2,646,243 - PS417_12180 0.43 +0.1 2,646,243 - PS417_12180 0.43 -0.2 2,646,243 - PS417_12180 0.43 +0.4 2,646,346 + PS417_12180 0.49 +0.3
Or see this region's nucleotide sequence