Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11035 and PS417_11040 are separated by 53 nucleotides PS417_11040 and PS417_11045 are separated by 137 nucleotides
PS417_11035: PS417_11035 - arabinose ABC transporter permease, at 2,365,580 to 2,366,548
_11035
PS417_11040: PS417_11040 - aldose epimerase, at 2,366,602 to 2,367,750
_11040
PS417_11045: PS417_11045 - 3-oxoacyl-ACP reductase, at 2,367,888 to 2,368,655
_11045
Position (kb)
2366
2367
2368 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2366.153 kb on + strand, within PS417_11035 at 2366.162 kb on + strand, within PS417_11035 at 2366.480 kb on + strand at 2366.486 kb on + strand at 2366.486 kb on + strand at 2366.568 kb on - strand at 2366.640 kb on - strand at 2366.739 kb on - strand, within PS417_11040 at 2367.128 kb on + strand, within PS417_11040 at 2367.128 kb on + strand, within PS417_11040 at 2367.129 kb on - strand, within PS417_11040 at 2367.273 kb on - strand, within PS417_11040 at 2367.273 kb on - strand, within PS417_11040 at 2367.273 kb on - strand, within PS417_11040 at 2367.325 kb on + strand, within PS417_11040 at 2367.325 kb on + strand, within PS417_11040 at 2367.569 kb on + strand, within PS417_11040 at 2367.570 kb on - strand, within PS417_11040 at 2367.573 kb on + strand, within PS417_11040 at 2367.573 kb on + strand, within PS417_11040 at 2367.574 kb on - strand, within PS417_11040 at 2367.614 kb on + strand, within PS417_11040 at 2367.614 kb on + strand, within PS417_11040 at 2367.615 kb on - strand, within PS417_11040 at 2367.837 kb on - strand at 2367.837 kb on - strand at 2367.870 kb on + strand at 2367.885 kb on + strand at 2367.885 kb on + strand at 2367.885 kb on + strand at 2367.886 kb on - strand at 2368.116 kb on + strand, within PS417_11045 at 2368.116 kb on + strand, within PS417_11045 at 2368.117 kb on - strand, within PS417_11045 at 2368.117 kb on - strand, within PS417_11045 at 2368.451 kb on + strand, within PS417_11045 at 2368.452 kb on - strand, within PS417_11045 at 2368.631 kb on + strand at 2368.739 kb on + strand at 2368.739 kb on + strand at 2368.739 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 2,366,153 + PS417_11035 0.59 +0.6 2,366,162 + PS417_11035 0.60 -0.1 2,366,480 + -0.7 2,366,486 + -0.8 2,366,486 + +0.3 2,366,568 - +0.0 2,366,640 - -0.4 2,366,739 - PS417_11040 0.12 -0.3 2,367,128 + PS417_11040 0.46 +1.1 2,367,128 + PS417_11040 0.46 -0.6 2,367,129 - PS417_11040 0.46 +0.1 2,367,273 - PS417_11040 0.58 -2.0 2,367,273 - PS417_11040 0.58 +1.1 2,367,273 - PS417_11040 0.58 -1.3 2,367,325 + PS417_11040 0.63 -0.4 2,367,325 + PS417_11040 0.63 -0.8 2,367,569 + PS417_11040 0.84 -1.2 2,367,570 - PS417_11040 0.84 -0.6 2,367,573 + PS417_11040 0.85 +0.0 2,367,573 + PS417_11040 0.85 -1.2 2,367,574 - PS417_11040 0.85 +0.7 2,367,614 + PS417_11040 0.88 -0.6 2,367,614 + PS417_11040 0.88 +0.1 2,367,615 - PS417_11040 0.88 +0.3 2,367,837 - +0.5 2,367,837 - +0.0 2,367,870 + +2.5 2,367,885 + -0.5 2,367,885 + +0.4 2,367,885 + +0.5 2,367,886 - -0.9 2,368,116 + PS417_11045 0.30 -0.5 2,368,116 + PS417_11045 0.30 -0.0 2,368,117 - PS417_11045 0.30 -0.3 2,368,117 - PS417_11045 0.30 -0.2 2,368,451 + PS417_11045 0.73 +0.5 2,368,452 - PS417_11045 0.73 +0.4 2,368,631 + -0.6 2,368,739 + -0.2 2,368,739 + +0.5 2,368,739 + +1.1
Or see this region's nucleotide sequence