Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09585 and PS417_09590 are separated by 85 nucleotides PS417_09590 and PS417_09595 overlap by 1 nucleotides
PS417_09585: PS417_09585 - acetyltransferase, at 2,075,137 to 2,076,183
_09585
PS417_09590: PS417_09590 - membrane protein, at 2,076,269 to 2,077,678
_09590
PS417_09595: PS417_09595 - membrane protein, at 2,077,678 to 2,079,105
_09595
Position (kb)
2076
2077
2078 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2075.363 kb on + strand, within PS417_09585 at 2075.363 kb on + strand, within PS417_09585 at 2075.364 kb on - strand, within PS417_09585 at 2075.364 kb on - strand, within PS417_09585 at 2075.364 kb on - strand, within PS417_09585 at 2075.427 kb on - strand, within PS417_09585 at 2075.428 kb on + strand, within PS417_09585 at 2075.429 kb on - strand, within PS417_09585 at 2075.609 kb on + strand, within PS417_09585 at 2075.610 kb on - strand at 2075.610 kb on - strand, within PS417_09585 at 2075.610 kb on - strand at 2075.610 kb on - strand, within PS417_09585 at 2075.939 kb on + strand, within PS417_09585 at 2075.939 kb on + strand, within PS417_09585 at 2075.944 kb on - strand, within PS417_09585 at 2075.944 kb on - strand, within PS417_09585 at 2075.944 kb on - strand, within PS417_09585 at 2075.944 kb on - strand, within PS417_09585 at 2076.219 kb on + strand at 2077.002 kb on - strand, within PS417_09590 at 2077.182 kb on + strand, within PS417_09590 at 2077.183 kb on - strand, within PS417_09590 at 2077.208 kb on + strand, within PS417_09590 at 2077.261 kb on + strand, within PS417_09590 at 2077.261 kb on + strand, within PS417_09590 at 2077.262 kb on - strand, within PS417_09590 at 2077.483 kb on - strand, within PS417_09590 at 2077.715 kb on - strand at 2077.826 kb on + strand, within PS417_09595 at 2077.827 kb on - strand, within PS417_09595 at 2077.827 kb on - strand, within PS417_09595 at 2077.994 kb on + strand, within PS417_09595 at 2077.994 kb on + strand, within PS417_09595 at 2077.995 kb on - strand, within PS417_09595 at 2077.995 kb on - strand, within PS417_09595 at 2078.000 kb on + strand, within PS417_09595 at 2078.000 kb on + strand, within PS417_09595 at 2078.001 kb on - strand at 2078.187 kb on - strand, within PS417_09595 at 2078.244 kb on - strand, within PS417_09595
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 2,075,363 + PS417_09585 0.22 -0.1 2,075,363 + PS417_09585 0.22 +0.3 2,075,364 - PS417_09585 0.22 +0.3 2,075,364 - PS417_09585 0.22 +0.7 2,075,364 - PS417_09585 0.22 +0.0 2,075,427 - PS417_09585 0.28 -0.6 2,075,428 + PS417_09585 0.28 +0.5 2,075,429 - PS417_09585 0.28 +0.1 2,075,609 + PS417_09585 0.45 +0.5 2,075,610 - -1.6 2,075,610 - PS417_09585 0.45 +0.8 2,075,610 - -0.1 2,075,610 - PS417_09585 0.45 +0.6 2,075,939 + PS417_09585 0.77 +0.3 2,075,939 + PS417_09585 0.77 +2.6 2,075,944 - PS417_09585 0.77 +0.2 2,075,944 - PS417_09585 0.77 +1.0 2,075,944 - PS417_09585 0.77 -0.6 2,075,944 - PS417_09585 0.77 -2.2 2,076,219 + -0.9 2,077,002 - PS417_09590 0.52 -0.3 2,077,182 + PS417_09590 0.65 -0.8 2,077,183 - PS417_09590 0.65 -1.4 2,077,208 + PS417_09590 0.67 +0.0 2,077,261 + PS417_09590 0.70 -1.4 2,077,261 + PS417_09590 0.70 -0.7 2,077,262 - PS417_09590 0.70 -2.0 2,077,483 - PS417_09590 0.86 -0.5 2,077,715 - +0.2 2,077,826 + PS417_09595 0.10 +0.0 2,077,827 - PS417_09595 0.10 +0.9 2,077,827 - PS417_09595 0.10 +0.2 2,077,994 + PS417_09595 0.22 +0.1 2,077,994 + PS417_09595 0.22 -3.5 2,077,995 - PS417_09595 0.22 -0.6 2,077,995 - PS417_09595 0.22 -0.1 2,078,000 + PS417_09595 0.23 -0.2 2,078,000 + PS417_09595 0.23 -0.6 2,078,001 - -0.4 2,078,187 - PS417_09595 0.36 +0.1 2,078,244 - PS417_09595 0.40 -0.3
Or see this region's nucleotide sequence