Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00915 and PS417_00920 are separated by 166 nucleotides PS417_00920 and PS417_00925 are separated by 211 nucleotides PS417_00925 and PS417_00930 are separated by 73 nucleotides
PS417_00915: PS417_00915 - aminotransferase, at 204,672 to 205,856
_00915
PS417_00920: PS417_00920 - diguanylate cyclase, at 206,023 to 207,936
_00920
PS417_00925: PS417_00925 - hypothetical protein, at 208,148 to 208,330
_00925
PS417_00930: PS417_00930 - ABC transporter permease, at 208,404 to 209,414
_00930
Position (kb) 206
207
208 Strain fitness (log2 ratio) -1
0
1 at 205.395 kb on - strand, within PS417_00915 at 205.468 kb on + strand, within PS417_00915 at 205.712 kb on + strand, within PS417_00915 at 205.751 kb on - strand at 205.762 kb on + strand at 205.763 kb on - strand at 205.849 kb on + strand at 205.849 kb on + strand at 205.850 kb on - strand at 205.850 kb on - strand at 205.856 kb on + strand at 205.856 kb on + strand at 205.863 kb on + strand at 205.864 kb on - strand at 205.962 kb on - strand at 205.966 kb on + strand at 205.966 kb on + strand at 205.967 kb on - strand at 205.967 kb on - strand at 205.969 kb on - strand at 206.022 kb on + strand at 206.023 kb on - strand at 206.048 kb on + strand at 206.064 kb on - strand at 206.064 kb on - strand at 206.064 kb on - strand at 206.064 kb on - strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.065 kb on + strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.066 kb on - strand at 206.109 kb on - strand at 206.109 kb on - strand at 206.167 kb on + strand at 206.584 kb on + strand, within PS417_00920 at 207.130 kb on + strand, within PS417_00920 at 207.220 kb on + strand, within PS417_00920 at 207.220 kb on + strand, within PS417_00920 at 207.223 kb on + strand, within PS417_00920 at 207.224 kb on - strand, within PS417_00920 at 207.325 kb on - strand, within PS417_00920 at 208.081 kb on + strand at 208.081 kb on + strand at 208.081 kb on + strand at 208.081 kb on + strand at 208.081 kb on + strand at 208.081 kb on + strand at 208.081 kb on + strand at 208.082 kb on - strand at 208.082 kb on - strand at 208.127 kb on - strand at 208.135 kb on - strand at 208.135 kb on - strand at 208.135 kb on - strand at 208.162 kb on - strand at 208.162 kb on - strand at 208.165 kb on + strand at 208.258 kb on + strand, within PS417_00925 at 208.272 kb on + strand, within PS417_00925 at 208.329 kb on - strand at 208.353 kb on + strand at 208.354 kb on - strand at 208.365 kb on + strand at 208.366 kb on - strand at 208.366 kb on - strand at 208.366 kb on - strand at 208.367 kb on + strand at 208.367 kb on + strand at 208.403 kb on + strand at 208.403 kb on + strand at 208.404 kb on - strand at 208.404 kb on - strand at 208.404 kb on - strand at 208.404 kb on - strand at 208.479 kb on + strand at 208.530 kb on + strand, within PS417_00930 at 208.530 kb on + strand, within PS417_00930 at 208.796 kb on + strand, within PS417_00930 at 208.797 kb on - strand, within PS417_00930
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 205,395 - PS417_00915 0.61 -0.8 205,468 + PS417_00915 0.67 +0.2 205,712 + PS417_00915 0.88 +0.5 205,751 - -0.5 205,762 + +0.7 205,763 - -1.0 205,849 + -0.0 205,849 + +0.0 205,850 - -0.5 205,850 - -1.1 205,856 + +0.5 205,856 + +1.0 205,863 + -0.4 205,864 - -0.1 205,962 - -0.6 205,966 + +0.3 205,966 + -0.3 205,967 - +0.9 205,967 - -0.4 205,969 - -0.4 206,022 + -0.6 206,023 - -0.5 206,048 + -0.9 206,064 - -0.0 206,064 - -0.4 206,064 - +0.1 206,064 - -0.8 206,065 + -0.2 206,065 + +1.2 206,065 + +0.2 206,065 + +0.6 206,065 + -1.0 206,066 - -0.1 206,066 - -0.7 206,066 - -0.8 206,066 - +0.7 206,109 - -1.5 206,109 - +0.7 206,167 + -0.7 206,584 + PS417_00920 0.29 +0.2 207,130 + PS417_00920 0.58 +0.2 207,220 + PS417_00920 0.63 -0.3 207,220 + PS417_00920 0.63 -0.6 207,223 + PS417_00920 0.63 +0.5 207,224 - PS417_00920 0.63 -0.2 207,325 - PS417_00920 0.68 -1.0 208,081 + +0.3 208,081 + +0.7 208,081 + +0.0 208,081 + +0.6 208,081 + -0.4 208,081 + -0.5 208,081 + -0.2 208,082 - +0.6 208,082 - +0.4 208,127 - +0.2 208,135 - -0.1 208,135 - +0.8 208,135 - -0.2 208,162 - +0.1 208,162 - -0.4 208,165 + +1.2 208,258 + PS417_00925 0.60 -1.4 208,272 + PS417_00925 0.68 -0.7 208,329 - +0.9 208,353 + +0.2 208,354 - -1.5 208,365 + -0.5 208,366 - -0.1 208,366 - +0.1 208,366 - -0.4 208,367 + -0.0 208,367 + +0.0 208,403 + +0.1 208,403 + -0.1 208,404 - -0.0 208,404 - -0.1 208,404 - -0.4 208,404 - +0.7 208,479 + +1.0 208,530 + PS417_00930 0.12 +0.8 208,530 + PS417_00930 0.12 +0.1 208,796 + PS417_00930 0.39 -0.8 208,797 - PS417_00930 0.39 -0.3
Or see this region's nucleotide sequence