Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09020 and PS417_09025 are separated by 97 nucleotides PS417_09025 and PS417_09030 overlap by 4 nucleotides PS417_09030 and PS417_09035 are separated by 102 nucleotides PS417_09035 and PS417_09040 are separated by 72 nucleotides
PS417_09020: PS417_09020 - esterase, at 1,964,678 to 1,965,121
_09020
PS417_09025: PS417_09025 - alpha/beta hydrolase, at 1,965,219 to 1,966,022
_09025
PS417_09030: PS417_09030 - alpha/beta hydrolase, at 1,966,019 to 1,966,873
_09030
PS417_09035: PS417_09035 - hypothetical protein, at 1,966,976 to 1,967,794
_09035
PS417_09040: PS417_09040 - hypothetical protein, at 1,967,867 to 1,968,928
_09040
Position (kb)
1966
1967 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1965.153 kb on + strand at 1965.153 kb on + strand at 1965.154 kb on - strand at 1965.154 kb on - strand at 1965.154 kb on - strand at 1965.154 kb on - strand at 1965.271 kb on - strand at 1965.305 kb on + strand, within PS417_09025 at 1965.305 kb on + strand, within PS417_09025 at 1965.306 kb on - strand, within PS417_09025 at 1965.360 kb on - strand, within PS417_09025 at 1965.486 kb on + strand, within PS417_09025 at 1965.646 kb on - strand, within PS417_09025 at 1965.646 kb on - strand, within PS417_09025 at 1965.700 kb on - strand, within PS417_09025 at 1965.700 kb on - strand, within PS417_09025 at 1965.717 kb on + strand, within PS417_09025 at 1965.718 kb on - strand, within PS417_09025 at 1965.775 kb on - strand, within PS417_09025 at 1966.229 kb on - strand, within PS417_09030 at 1966.229 kb on - strand, within PS417_09030 at 1966.256 kb on + strand, within PS417_09030 at 1966.262 kb on + strand, within PS417_09030 at 1966.312 kb on - strand, within PS417_09030 at 1966.496 kb on + strand, within PS417_09030 at 1966.497 kb on - strand, within PS417_09030 at 1966.497 kb on - strand, within PS417_09030 at 1966.498 kb on + strand, within PS417_09030 at 1966.692 kb on + strand, within PS417_09030 at 1966.975 kb on + strand at 1966.975 kb on + strand at 1966.976 kb on - strand at 1966.997 kb on - strand at 1967.134 kb on + strand, within PS417_09035 at 1967.135 kb on - strand, within PS417_09035 at 1967.138 kb on + strand, within PS417_09035 at 1967.226 kb on - strand, within PS417_09035 at 1967.496 kb on + strand, within PS417_09035 at 1967.798 kb on + strand at 1967.830 kb on - strand at 1967.842 kb on + strand at 1967.842 kb on + strand at 1967.864 kb on + strand at 1967.864 kb on + strand at 1967.865 kb on - strand at 1967.865 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,965,153 + +0.4 1,965,153 + +0.8 1,965,154 - +0.3 1,965,154 - +0.9 1,965,154 - -0.3 1,965,154 - -0.1 1,965,271 - -0.7 1,965,305 + PS417_09025 0.11 +0.7 1,965,305 + PS417_09025 0.11 +0.5 1,965,306 - PS417_09025 0.11 +0.8 1,965,360 - PS417_09025 0.18 -0.6 1,965,486 + PS417_09025 0.33 -0.1 1,965,646 - PS417_09025 0.53 -0.0 1,965,646 - PS417_09025 0.53 -0.3 1,965,700 - PS417_09025 0.60 +0.4 1,965,700 - PS417_09025 0.60 +0.3 1,965,717 + PS417_09025 0.62 +0.8 1,965,718 - PS417_09025 0.62 +0.5 1,965,775 - PS417_09025 0.69 -0.2 1,966,229 - PS417_09030 0.25 -0.1 1,966,229 - PS417_09030 0.25 -0.0 1,966,256 + PS417_09030 0.28 +0.7 1,966,262 + PS417_09030 0.28 +0.7 1,966,312 - PS417_09030 0.34 -0.1 1,966,496 + PS417_09030 0.56 +1.1 1,966,497 - PS417_09030 0.56 +1.3 1,966,497 - PS417_09030 0.56 +0.4 1,966,498 + PS417_09030 0.56 +0.6 1,966,692 + PS417_09030 0.79 +2.0 1,966,975 + -1.1 1,966,975 + -2.9 1,966,976 - -1.5 1,966,997 - -0.8 1,967,134 + PS417_09035 0.19 -0.6 1,967,135 - PS417_09035 0.19 -1.4 1,967,138 + PS417_09035 0.20 -2.1 1,967,226 - PS417_09035 0.31 -2.2 1,967,496 + PS417_09035 0.63 -1.4 1,967,798 + -0.2 1,967,830 - -0.4 1,967,842 + +0.2 1,967,842 + +0.7 1,967,864 + -1.6 1,967,864 + +0.0 1,967,865 - -0.1 1,967,865 - +0.7
Or see this region's nucleotide sequence