Strain Fitness in Pseudomonas simiae WCS417 around PS417_09010
Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.06 vol% |
---|---|---|---|---|---|
remove | |||||
1,962,146 | + | -0.4 | |||
1,962,147 | - | +0.4 | |||
1,962,249 | - | PS417_09005 | 0.37 | -0.9 | |
1,962,614 | - | PS417_09010 | 0.34 | -0.1 | |
1,962,656 | + | PS417_09010 | 0.43 | -1.2 | |
1,962,656 | + | PS417_09010 | 0.43 | -0.8 | |
1,962,657 | - | PS417_09010 | 0.43 | -0.6 | |
1,962,937 | + | +0.8 | |||
1,962,937 | + | -0.3 | |||
1,962,937 | + | +1.3 | |||
1,962,937 | + | -0.2 | |||
1,962,937 | + | -0.9 | |||
1,962,938 | - | -0.1 | |||
1,962,938 | - | +0.2 | |||
1,962,938 | - | -0.2 | |||
1,962,938 | - | +0.1 | |||
1,962,939 | + | -0.9 | |||
1,962,939 | + | +0.7 | |||
1,962,940 | - | +0.7 | |||
1,962,940 | - | -0.3 | |||
1,962,940 | - | +0.5 | |||
1,962,940 | - | -0.3 | |||
1,963,108 | + | -0.3 | |||
1,963,382 | - | PS417_09015 | 0.23 | +0.4 | |
1,963,382 | - | PS417_09015 | 0.23 | +0.2 | |
1,963,514 | + | PS417_09015 | 0.31 | +0.1 | |
1,963,514 | + | PS417_09015 | 0.31 | +0.2 | |
1,963,515 | - | PS417_09015 | 0.31 | -2.0 | |
1,963,515 | - | PS417_09015 | 0.31 | +0.0 | |
1,963,515 | - | PS417_09015 | 0.31 | -0.2 | |
1,963,516 | + | PS417_09015 | 0.31 | -0.1 | |
1,963,517 | - | PS417_09015 | 0.31 | +0.7 | |
1,963,517 | - | PS417_09015 | 0.31 | +0.4 | |
1,963,634 | + | PS417_09015 | 0.39 | +0.7 |
Or see this region's nucleotide sequence