Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_08665 and PS417_08670 are separated by 76 nucleotides PS417_08670 and PS417_08675 overlap by 17 nucleotides PS417_08675 and PS417_08680 are separated by 128 nucleotides PS417_08680 and PS417_08685 overlap by 4 nucleotides
PS417_08665: PS417_08665 - molybdopterin-guanine dinucleotide biosynthesis protein A, at 1,890,659 to 1,891,261
_08665
PS417_08670: PS417_08670 - molybdopterin biosynthesis protein B, at 1,891,338 to 1,891,877
_08670
PS417_08675: PS417_08675 - molybdenum cofactor biosynthesis protein MoaA, at 1,891,861 to 1,893,087
_08675
PS417_08680: PS417_08680 - flagellar biosynthesis protein FlhB, at 1,893,216 to 1,893,545
_08680
PS417_08685: PS417_08685 - flagellar hook-length control protein FliK, at 1,893,542 to 1,895,119
_08685
Position (kb)
1891
1892
1893
1894 Strain fitness (log2 ratio)
-2
-1
0
1 at 1891.071 kb on + strand, within PS417_08665 at 1891.071 kb on + strand, within PS417_08665 at 1891.072 kb on - strand, within PS417_08665 at 1891.072 kb on - strand, within PS417_08665 at 1891.195 kb on + strand, within PS417_08665 at 1891.299 kb on + strand at 1891.300 kb on - strand at 1891.301 kb on + strand at 1891.301 kb on + strand at 1891.302 kb on - strand at 1891.302 kb on - strand at 1891.384 kb on + strand at 1891.406 kb on + strand, within PS417_08670 at 1892.324 kb on + strand, within PS417_08675 at 1892.324 kb on + strand, within PS417_08675 at 1892.325 kb on - strand, within PS417_08675 at 1892.486 kb on - strand, within PS417_08675 at 1892.821 kb on + strand, within PS417_08675 at 1892.821 kb on + strand, within PS417_08675 at 1892.822 kb on - strand, within PS417_08675 at 1892.822 kb on - strand, within PS417_08675 at 1893.069 kb on - strand at 1893.069 kb on - strand at 1893.337 kb on + strand, within PS417_08680 at 1893.407 kb on - strand at 1893.503 kb on - strand, within PS417_08680
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,891,071 + PS417_08665 0.68 -1.2 1,891,071 + PS417_08665 0.68 -0.9 1,891,072 - PS417_08665 0.68 +0.4 1,891,072 - PS417_08665 0.68 -1.4 1,891,195 + PS417_08665 0.89 -2.3 1,891,299 + -0.7 1,891,300 - +0.2 1,891,301 + -0.7 1,891,301 + -0.0 1,891,302 - -0.9 1,891,302 - -0.2 1,891,384 + -2.0 1,891,406 + PS417_08670 0.13 -1.5 1,892,324 + PS417_08675 0.38 -1.6 1,892,324 + PS417_08675 0.38 -1.4 1,892,325 - PS417_08675 0.38 -1.1 1,892,486 - PS417_08675 0.51 +0.1 1,892,821 + PS417_08675 0.78 -0.9 1,892,821 + PS417_08675 0.78 -1.2 1,892,822 - PS417_08675 0.78 -0.4 1,892,822 - PS417_08675 0.78 +0.0 1,893,069 - -1.2 1,893,069 - -0.4 1,893,337 + PS417_08680 0.37 +1.0 1,893,407 - +0.4 1,893,503 - PS417_08680 0.87 +0.2
Or see this region's nucleotide sequence