Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07575 and PS417_07580 are separated by 29 nucleotides PS417_07580 and PS417_07585 are separated by 97 nucleotides PS417_07585 and PS417_07590 are separated by 114 nucleotides
PS417_07575: PS417_07575 - multifunctional fatty acid oxidation complex subunit alpha, at 1,666,380 to 1,668,527
_07575
PS417_07580: PS417_07580 - 3-ketoacyl-CoA thiolase, at 1,668,557 to 1,669,732
_07580
PS417_07585: PS417_07585 - hypothetical protein, at 1,669,830 to 1,670,066
_07585
PS417_07590: PS417_07590 - DNA topoisomerase I, at 1,670,181 to 1,672,802
_07590
Position (kb)
1668
1669
1670 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1668.147 kb on + strand, within PS417_07575 at 1668.357 kb on + strand at 1668.357 kb on + strand at 1668.358 kb on - strand at 1668.447 kb on + strand at 1668.553 kb on - strand at 1668.556 kb on + strand at 1668.557 kb on - strand at 1669.185 kb on - strand, within PS417_07580 at 1669.731 kb on - strand at 1669.731 kb on - strand at 1669.851 kb on + strand at 1669.860 kb on + strand, within PS417_07585 at 1669.860 kb on + strand, within PS417_07585 at 1669.861 kb on - strand, within PS417_07585 at 1669.861 kb on - strand, within PS417_07585 at 1669.862 kb on + strand, within PS417_07585 at 1669.863 kb on - strand, within PS417_07585 at 1669.929 kb on + strand, within PS417_07585 at 1669.941 kb on + strand, within PS417_07585 at 1669.941 kb on + strand, within PS417_07585 at 1669.942 kb on - strand, within PS417_07585 at 1669.942 kb on - strand, within PS417_07585 at 1670.113 kb on + strand at 1670.113 kb on + strand at 1670.113 kb on + strand at 1670.115 kb on + strand at 1670.115 kb on + strand at 1670.115 kb on + strand at 1670.115 kb on + strand at 1670.115 kb on + strand at 1670.115 kb on + strand at 1670.115 kb on + strand at 1670.115 kb on + strand at 1670.117 kb on + strand at 1670.119 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,668,147 + PS417_07575 0.82 -0.7 1,668,357 + +1.8 1,668,357 + -1.4 1,668,358 - -0.2 1,668,447 + +0.8 1,668,553 - -1.7 1,668,556 + -0.5 1,668,557 - +0.2 1,669,185 - PS417_07580 0.53 -0.2 1,669,731 - +0.3 1,669,731 - -0.2 1,669,851 + -1.1 1,669,860 + PS417_07585 0.13 -0.2 1,669,860 + PS417_07585 0.13 -0.8 1,669,861 - PS417_07585 0.13 +1.0 1,669,861 - PS417_07585 0.13 -1.8 1,669,862 + PS417_07585 0.14 -0.2 1,669,863 - PS417_07585 0.14 -0.1 1,669,929 + PS417_07585 0.42 +0.5 1,669,941 + PS417_07585 0.47 +0.2 1,669,941 + PS417_07585 0.47 -0.4 1,669,942 - PS417_07585 0.47 -0.2 1,669,942 - PS417_07585 0.47 -0.4 1,670,113 + -0.5 1,670,113 + -0.2 1,670,113 + -0.4 1,670,115 + -0.1 1,670,115 + +0.3 1,670,115 + -0.3 1,670,115 + +0.8 1,670,115 + -0.3 1,670,115 + -0.2 1,670,115 + -1.0 1,670,115 + -0.6 1,670,117 + +0.3 1,670,119 + +0.4
Or see this region's nucleotide sequence