Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07565 and PS417_07575 are separated by 481 nucleotides PS417_07575 and PS417_07580 are separated by 29 nucleotides
PS417_07565: PS417_07565 - hypothetical protein, at 1,665,461 to 1,665,898
_07565
PS417_07575: PS417_07575 - multifunctional fatty acid oxidation complex subunit alpha, at 1,666,380 to 1,668,527
_07575
PS417_07580: PS417_07580 - 3-ketoacyl-CoA thiolase, at 1,668,557 to 1,669,732
_07580
Position (kb)
1666
1667
1668
1669 Strain fitness (log2 ratio)
-1
0
1
2 at 1665.381 kb on + strand at 1665.381 kb on + strand at 1665.382 kb on - strand at 1665.382 kb on - strand at 1665.455 kb on - strand at 1665.460 kb on + strand at 1665.460 kb on + strand at 1665.460 kb on + strand at 1665.460 kb on + strand at 1665.460 kb on + strand at 1665.461 kb on - strand at 1665.461 kb on - strand at 1665.461 kb on - strand at 1665.461 kb on - strand at 1665.461 kb on - strand at 1665.794 kb on + strand, within PS417_07565 at 1665.831 kb on - strand, within PS417_07565 at 1665.831 kb on - strand, within PS417_07565 at 1665.831 kb on - strand, within PS417_07565 at 1665.831 kb on - strand, within PS417_07565 at 1665.868 kb on + strand at 1665.911 kb on - strand at 1666.017 kb on - strand at 1666.023 kb on - strand at 1666.023 kb on - strand at 1666.037 kb on - strand at 1666.147 kb on + strand at 1666.248 kb on - strand at 1666.248 kb on - strand at 1666.395 kb on - strand at 1666.943 kb on - strand, within PS417_07575 at 1666.943 kb on - strand, within PS417_07575 at 1667.124 kb on + strand, within PS417_07575 at 1667.298 kb on + strand at 1667.532 kb on - strand, within PS417_07575 at 1668.147 kb on + strand, within PS417_07575 at 1668.357 kb on + strand at 1668.357 kb on + strand at 1668.358 kb on - strand at 1668.447 kb on + strand at 1668.553 kb on - strand at 1668.556 kb on + strand at 1668.557 kb on - strand at 1669.185 kb on - strand, within PS417_07580
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,665,381 + +0.6 1,665,381 + -0.8 1,665,382 - +0.5 1,665,382 - -0.5 1,665,455 - -0.3 1,665,460 + -0.8 1,665,460 + -0.5 1,665,460 + -0.1 1,665,460 + +0.1 1,665,460 + +0.4 1,665,461 - -0.8 1,665,461 - -0.9 1,665,461 - -0.7 1,665,461 - +0.7 1,665,461 - -1.2 1,665,794 + PS417_07565 0.76 -0.8 1,665,831 - PS417_07565 0.84 -0.1 1,665,831 - PS417_07565 0.84 +0.5 1,665,831 - PS417_07565 0.84 -0.7 1,665,831 - PS417_07565 0.84 -0.1 1,665,868 + +1.1 1,665,911 - -0.0 1,666,017 - -0.0 1,666,023 - -0.5 1,666,023 - -0.1 1,666,037 - +0.6 1,666,147 + +0.2 1,666,248 - -0.1 1,666,248 - -0.2 1,666,395 - -0.4 1,666,943 - PS417_07575 0.26 +0.4 1,666,943 - PS417_07575 0.26 -1.4 1,667,124 + PS417_07575 0.35 -1.1 1,667,298 + -1.2 1,667,532 - PS417_07575 0.54 -0.8 1,668,147 + PS417_07575 0.82 -0.7 1,668,357 + +1.8 1,668,357 + -1.4 1,668,358 - -0.2 1,668,447 + +0.8 1,668,553 - -1.7 1,668,556 + -0.5 1,668,557 - +0.2 1,669,185 - PS417_07580 0.53 -0.2
Or see this region's nucleotide sequence