Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06885 and PS417_06890 are separated by 28 nucleotides PS417_06890 and PS417_06895 are separated by 105 nucleotides PS417_06895 and PS417_06900 are separated by 139 nucleotides
PS417_06885: PS417_06885 - dihydrodipicolinate synthase, at 1,524,438 to 1,525,310
_06885
PS417_06890: PS417_06890 - aldolase, at 1,525,339 to 1,526,121
_06890
PS417_06895: PS417_06895 - DNA-binding protein, at 1,526,227 to 1,526,754
_06895
PS417_06900: PS417_06900 - hypothetical protein, at 1,526,894 to 1,527,910
_06900
Position (kb)
1526
1527 Strain fitness (log2 ratio)
-1
0
1
2 at 1525.276 kb on + strand at 1525.277 kb on - strand at 1525.383 kb on - strand at 1525.385 kb on + strand at 1525.385 kb on + strand at 1525.386 kb on - strand at 1525.386 kb on - strand at 1525.386 kb on - strand at 1525.386 kb on - strand at 1525.682 kb on + strand, within PS417_06890 at 1525.683 kb on - strand, within PS417_06890 at 1525.701 kb on + strand, within PS417_06890 at 1525.925 kb on + strand, within PS417_06890 at 1525.926 kb on - strand, within PS417_06890 at 1525.928 kb on + strand, within PS417_06890 at 1525.929 kb on - strand, within PS417_06890 at 1525.929 kb on - strand, within PS417_06890 at 1526.040 kb on + strand, within PS417_06890 at 1526.040 kb on + strand, within PS417_06890 at 1526.041 kb on - strand, within PS417_06890 at 1526.041 kb on - strand at 1526.108 kb on - strand at 1526.268 kb on + strand at 1526.311 kb on + strand, within PS417_06895 at 1526.311 kb on + strand, within PS417_06895 at 1526.312 kb on - strand, within PS417_06895 at 1526.312 kb on - strand, within PS417_06895 at 1526.435 kb on - strand, within PS417_06895 at 1526.533 kb on + strand, within PS417_06895 at 1526.534 kb on - strand, within PS417_06895 at 1527.095 kb on - strand, within PS417_06900 at 1527.159 kb on + strand, within PS417_06900 at 1527.174 kb on + strand, within PS417_06900 at 1527.376 kb on + strand, within PS417_06900 at 1527.462 kb on + strand, within PS417_06900 at 1527.478 kb on - strand, within PS417_06900 at 1527.478 kb on - strand, within PS417_06900 at 1527.501 kb on + strand, within PS417_06900 at 1527.502 kb on - strand, within PS417_06900 at 1527.581 kb on - strand, within PS417_06900 at 1527.581 kb on - strand, within PS417_06900
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,525,276 + -0.3 1,525,277 - +1.1 1,525,383 - -0.3 1,525,385 + -0.3 1,525,385 + -0.0 1,525,386 - -0.2 1,525,386 - +0.4 1,525,386 - -0.2 1,525,386 - +0.3 1,525,682 + PS417_06890 0.44 +0.4 1,525,683 - PS417_06890 0.44 -0.8 1,525,701 + PS417_06890 0.46 +0.4 1,525,925 + PS417_06890 0.75 +0.2 1,525,926 - PS417_06890 0.75 +0.2 1,525,928 + PS417_06890 0.75 +0.1 1,525,929 - PS417_06890 0.75 -0.0 1,525,929 - PS417_06890 0.75 -0.7 1,526,040 + PS417_06890 0.90 +0.9 1,526,040 + PS417_06890 0.90 +0.8 1,526,041 - PS417_06890 0.90 -0.4 1,526,041 - +0.1 1,526,108 - +0.1 1,526,268 + -1.4 1,526,311 + PS417_06895 0.16 -0.4 1,526,311 + PS417_06895 0.16 -0.7 1,526,312 - PS417_06895 0.16 -0.8 1,526,312 - PS417_06895 0.16 -1.3 1,526,435 - PS417_06895 0.39 +0.8 1,526,533 + PS417_06895 0.58 -0.8 1,526,534 - PS417_06895 0.58 -0.2 1,527,095 - PS417_06900 0.20 +0.5 1,527,159 + PS417_06900 0.26 +0.3 1,527,174 + PS417_06900 0.28 +0.5 1,527,376 + PS417_06900 0.47 -1.0 1,527,462 + PS417_06900 0.56 +0.4 1,527,478 - PS417_06900 0.57 +1.8 1,527,478 - PS417_06900 0.57 -0.0 1,527,501 + PS417_06900 0.60 -0.2 1,527,502 - PS417_06900 0.60 +0.1 1,527,581 - PS417_06900 0.68 +0.2 1,527,581 - PS417_06900 0.68 +0.4
Or see this region's nucleotide sequence