Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06735 and PS417_06740 are separated by 10 nucleotides PS417_06740 and PS417_06745 are separated by 133 nucleotides PS417_06745 and PS417_06750 are separated by 116 nucleotides
PS417_06735: PS417_06735 - 3-oxoadipate enol-lactonase, at 1,491,487 to 1,492,278
_06735
PS417_06740: PS417_06740 - 4-carboxymuconolactone decarboxylase, at 1,492,289 to 1,492,687
_06740
PS417_06745: PS417_06745 - polysaccharide deacetylase, at 1,492,821 to 1,493,720
_06745
PS417_06750: PS417_06750 - hemolysin, at 1,493,837 to 1,495,339
_06750
Position (kb)
1492
1493
1494 Strain fitness (log2 ratio)
-2
-1
0
1 at 1491.923 kb on + strand, within PS417_06735 at 1492.058 kb on + strand, within PS417_06735 at 1492.175 kb on + strand, within PS417_06735 at 1492.201 kb on + strand at 1492.201 kb on + strand at 1492.202 kb on - strand at 1492.202 kb on - strand at 1492.695 kb on + strand at 1492.745 kb on - strand at 1492.745 kb on - strand at 1492.815 kb on + strand at 1492.937 kb on - strand, within PS417_06745 at 1492.999 kb on + strand, within PS417_06745 at 1493.782 kb on + strand at 1493.847 kb on + strand at 1493.847 kb on + strand at 1493.847 kb on + strand at 1493.848 kb on - strand at 1493.848 kb on - strand at 1493.848 kb on - strand at 1493.943 kb on - strand at 1494.036 kb on + strand, within PS417_06750 at 1494.036 kb on + strand, within PS417_06750 at 1494.036 kb on + strand, within PS417_06750 at 1494.037 kb on - strand, within PS417_06750 at 1494.078 kb on + strand, within PS417_06750 at 1494.079 kb on - strand, within PS417_06750 at 1494.117 kb on + strand, within PS417_06750 at 1494.226 kb on + strand, within PS417_06750 at 1494.227 kb on - strand, within PS417_06750 at 1494.244 kb on - strand, within PS417_06750 at 1494.280 kb on + strand, within PS417_06750 at 1494.280 kb on + strand, within PS417_06750 at 1494.281 kb on - strand, within PS417_06750 at 1494.422 kb on + strand, within PS417_06750 at 1494.502 kb on - strand, within PS417_06750 at 1494.556 kb on - strand, within PS417_06750 at 1494.633 kb on + strand, within PS417_06750 at 1494.634 kb on - strand, within PS417_06750 at 1494.639 kb on - strand, within PS417_06750
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,491,923 + PS417_06735 0.55 -0.1 1,492,058 + PS417_06735 0.72 -0.1 1,492,175 + PS417_06735 0.87 +0.3 1,492,201 + -0.3 1,492,201 + +0.2 1,492,202 - -0.9 1,492,202 - -0.3 1,492,695 + -0.3 1,492,745 - +0.8 1,492,745 - -0.0 1,492,815 + +0.4 1,492,937 - PS417_06745 0.13 -0.5 1,492,999 + PS417_06745 0.20 -0.8 1,493,782 + +0.5 1,493,847 + +0.8 1,493,847 + +0.4 1,493,847 + -0.7 1,493,848 - -1.2 1,493,848 - +0.3 1,493,848 - +0.3 1,493,943 - +0.8 1,494,036 + PS417_06750 0.13 -2.3 1,494,036 + PS417_06750 0.13 -0.2 1,494,036 + PS417_06750 0.13 -0.4 1,494,037 - PS417_06750 0.13 -0.3 1,494,078 + PS417_06750 0.16 +0.4 1,494,079 - PS417_06750 0.16 +0.5 1,494,117 + PS417_06750 0.19 -0.3 1,494,226 + PS417_06750 0.26 +0.3 1,494,227 - PS417_06750 0.26 +1.2 1,494,244 - PS417_06750 0.27 +0.0 1,494,280 + PS417_06750 0.29 -0.4 1,494,280 + PS417_06750 0.29 -0.3 1,494,281 - PS417_06750 0.30 -0.1 1,494,422 + PS417_06750 0.39 +0.1 1,494,502 - PS417_06750 0.44 +0.0 1,494,556 - PS417_06750 0.48 +0.5 1,494,633 + PS417_06750 0.53 -0.8 1,494,634 - PS417_06750 0.53 -0.3 1,494,639 - PS417_06750 0.53 -0.1
Or see this region's nucleotide sequence