Strain Fitness in Pseudomonas simiae WCS417 around PS417_06395
Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.06 vol% |
---|---|---|---|---|---|
remove | |||||
1,417,233 | - | PS417_06390 | 0.68 | -0.2 | |
1,417,233 | - | PS417_06390 | 0.68 | +0.5 | |
1,417,239 | - | PS417_06390 | 0.68 | -0.7 | |
1,417,279 | - | PS417_06390 | 0.70 | -0.1 | |
1,417,350 | - | PS417_06390 | 0.73 | +0.2 | |
1,417,367 | + | PS417_06390 | 0.73 | +0.4 | |
1,417,888 | + | -2.6 | |||
1,417,888 | + | -0.9 | |||
1,417,889 | - | -0.1 | |||
1,417,889 | - | -0.6 | |||
1,417,954 | - | +0.5 | |||
1,418,459 | - | PS417_06395 | 0.48 | -0.1 | |
1,418,543 | + | PS417_06395 | 0.59 | -0.9 | |
1,418,543 | + | PS417_06395 | 0.59 | -0.8 | |
1,418,544 | - | PS417_06395 | 0.60 | -2.0 | |
1,418,848 | + | +0.1 | |||
1,418,848 | + | +0.2 | |||
1,418,848 | + | -0.3 | |||
1,418,848 | + | -0.6 | |||
1,418,878 | + | +0.4 | |||
1,418,879 | - | -0.3 | |||
1,419,054 | - | PS417_06400 | 0.17 | +0.5 | |
1,419,076 | + | PS417_06400 | 0.19 | +0.2 | |
1,419,194 | + | PS417_06400 | 0.29 | -1.3 | |
1,419,404 | + | PS417_06400 | 0.48 | -0.6 | |
1,419,404 | + | PS417_06400 | 0.48 | +0.3 | |
1,419,405 | - | PS417_06400 | 0.48 | +0.6 | |
1,419,707 | + | PS417_06400 | 0.75 | +0.5 |
Or see this region's nucleotide sequence