Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06365 and PS417_06370 are separated by 206 nucleotides PS417_06370 and PS417_06375 are separated by 388 nucleotides
PS417_06365: PS417_06365 - RNA polymerase sigma factor, at 1,412,215 to 1,413,219
_06365
PS417_06370: PS417_06370 - cold-shock protein, at 1,413,426 to 1,413,635
_06370
PS417_06375: PS417_06375 - deoxycytidine triphosphate deaminase, at 1,414,024 to 1,414,590
_06375
Position (kb)
1413
1414 Strain fitness (log2 ratio)
-2
-1
0
1 at 1412.554 kb on + strand, within PS417_06365 at 1412.662 kb on + strand at 1412.662 kb on + strand, within PS417_06365 at 1412.662 kb on + strand, within PS417_06365 at 1413.101 kb on + strand, within PS417_06365 at 1413.277 kb on + strand at 1413.277 kb on + strand at 1413.277 kb on + strand at 1413.344 kb on + strand at 1413.345 kb on - strand at 1413.374 kb on + strand at 1413.391 kb on + strand at 1413.413 kb on - strand at 1413.413 kb on - strand at 1413.432 kb on - strand at 1413.608 kb on + strand, within PS417_06370 at 1413.609 kb on - strand, within PS417_06370 at 1413.640 kb on + strand at 1413.640 kb on + strand at 1413.640 kb on + strand at 1413.640 kb on + strand at 1413.641 kb on - strand at 1413.641 kb on - strand at 1413.641 kb on - strand at 1413.641 kb on - strand at 1413.658 kb on + strand at 1413.659 kb on - strand at 1413.744 kb on + strand at 1413.744 kb on + strand at 1413.744 kb on + strand at 1413.744 kb on + strand at 1413.745 kb on - strand at 1413.745 kb on - strand at 1413.745 kb on - strand at 1413.793 kb on - strand at 1413.821 kb on - strand at 1413.859 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.888 kb on - strand at 1413.888 kb on - strand at 1413.902 kb on - strand at 1413.913 kb on - strand at 1414.007 kb on + strand at 1414.354 kb on - strand, within PS417_06375 at 1414.603 kb on - strand at 1414.619 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,412,554 + PS417_06365 0.34 +0.7 1,412,662 + -0.7 1,412,662 + PS417_06365 0.44 -0.7 1,412,662 + PS417_06365 0.44 -1.3 1,413,101 + PS417_06365 0.88 -0.6 1,413,277 + -0.0 1,413,277 + +0.8 1,413,277 + +0.1 1,413,344 + -0.3 1,413,345 - -0.1 1,413,374 + +0.8 1,413,391 + -0.7 1,413,413 - -0.6 1,413,413 - -0.5 1,413,432 - -0.5 1,413,608 + PS417_06370 0.87 -1.2 1,413,609 - PS417_06370 0.87 -1.4 1,413,640 + -0.1 1,413,640 + -2.0 1,413,640 + -0.9 1,413,640 + -0.7 1,413,641 - -1.3 1,413,641 - +0.4 1,413,641 - -0.6 1,413,641 - -0.7 1,413,658 + -1.9 1,413,659 - +1.0 1,413,744 + -1.1 1,413,744 + -1.2 1,413,744 + -1.1 1,413,744 + -1.1 1,413,745 - -0.9 1,413,745 - -0.0 1,413,745 - -1.2 1,413,793 - -1.6 1,413,821 - -0.4 1,413,859 + -0.8 1,413,883 + +1.2 1,413,883 + -0.9 1,413,883 + -0.5 1,413,883 + -1.2 1,413,883 + -0.2 1,413,883 + +0.9 1,413,883 + -0.7 1,413,883 + -0.3 1,413,883 + +0.3 1,413,883 + -0.9 1,413,883 + -1.3 1,413,883 + -2.1 1,413,883 + -1.0 1,413,884 - -0.2 1,413,884 - -0.3 1,413,884 - -0.1 1,413,884 - -0.3 1,413,884 - +0.1 1,413,884 - +0.2 1,413,884 - -0.1 1,413,884 - -0.5 1,413,884 - +0.0 1,413,884 - -0.5 1,413,888 - +0.4 1,413,888 - -0.9 1,413,902 - +0.9 1,413,913 - -0.3 1,414,007 + -0.6 1,414,354 - PS417_06375 0.58 -1.7 1,414,603 - +0.1 1,414,619 - -0.1
Or see this region's nucleotide sequence