Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06065 and PS417_06070 are separated by 89 nucleotides PS417_06070 and PS417_06075 are separated by 160 nucleotides PS417_06075 and PS417_06080 overlap by 1 nucleotides PS417_06080 and PS417_06085 are separated by 27 nucleotides
PS417_06065: PS417_06065 - adenylate kinase, at 1,346,549 to 1,347,196
_06065
PS417_06070: PS417_06070 - peptidase M22, at 1,347,286 to 1,347,972
_06070
PS417_06075: PS417_06075 - hypothetical protein, at 1,348,133 to 1,348,423
_06075
PS417_06080: PS417_06080 - hypothetical protein, at 1,348,423 to 1,349,283
_06080
PS417_06085: PS417_06085 - 2-methylisocitrate lyase, at 1,349,311 to 1,350,138
_06085
Position (kb)
1348
1349 Strain fitness (log2 ratio)
-2
-1
0
1 at 1347.210 kb on + strand at 1347.210 kb on + strand at 1347.247 kb on + strand at 1347.249 kb on + strand at 1347.279 kb on + strand at 1348.050 kb on + strand at 1348.138 kb on + strand at 1348.204 kb on - strand, within PS417_06075 at 1348.358 kb on + strand, within PS417_06075 at 1348.435 kb on + strand at 1348.436 kb on - strand at 1348.438 kb on + strand at 1348.480 kb on + strand at 1348.567 kb on + strand, within PS417_06080 at 1348.567 kb on + strand, within PS417_06080 at 1348.567 kb on + strand, within PS417_06080 at 1348.568 kb on - strand, within PS417_06080 at 1348.568 kb on - strand, within PS417_06080 at 1348.568 kb on - strand, within PS417_06080 at 1348.770 kb on + strand, within PS417_06080 at 1348.770 kb on + strand, within PS417_06080 at 1348.771 kb on - strand, within PS417_06080 at 1348.839 kb on - strand, within PS417_06080 at 1348.918 kb on - strand, within PS417_06080 at 1348.918 kb on - strand, within PS417_06080 at 1349.141 kb on + strand, within PS417_06080 at 1349.141 kb on + strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 1,347,210 + +0.4 1,347,210 + -0.1 1,347,247 + +1.1 1,347,249 + -0.5 1,347,279 + +0.6 1,348,050 + +0.3 1,348,138 + -0.1 1,348,204 - PS417_06075 0.24 -1.2 1,348,358 + PS417_06075 0.77 -0.2 1,348,435 + -0.2 1,348,436 - -1.6 1,348,438 + -0.5 1,348,480 + -0.1 1,348,567 + PS417_06080 0.17 -0.2 1,348,567 + PS417_06080 0.17 -0.3 1,348,567 + PS417_06080 0.17 -0.4 1,348,568 - PS417_06080 0.17 +0.2 1,348,568 - PS417_06080 0.17 +0.2 1,348,568 - PS417_06080 0.17 +0.0 1,348,770 + PS417_06080 0.40 +0.3 1,348,770 + PS417_06080 0.40 -0.0 1,348,771 - PS417_06080 0.40 -2.6 1,348,839 - PS417_06080 0.48 +0.2 1,348,918 - PS417_06080 0.57 +0.0 1,348,918 - PS417_06080 0.57 +0.9 1,349,141 + PS417_06080 0.83 -0.7 1,349,141 + PS417_06080 0.83 -0.3 1,349,142 - PS417_06080 0.84 -0.1 1,349,142 - PS417_06080 0.84 -0.4 1,349,142 - PS417_06080 0.84 +0.2 1,349,142 - PS417_06080 0.84 -0.0 1,349,142 - PS417_06080 0.84 +0.7
Or see this region's nucleotide sequence