Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3093 and Echvi_3094 overlap by 4 nucleotides Echvi_3094 and Echvi_3095 are separated by 160 nucleotides
Echvi_3093: Echvi_3093 - hypothetical protein, at 3,694,934 to 3,695,632
_3093
Echvi_3094: Echvi_3094 - Protein of unknown function (DUF3307)., at 3,695,629 to 3,696,333
_3094
Echvi_3095: Echvi_3095 - Arylsulfatase A and related enzymes, at 3,696,494 to 3,698,104
_3095
Position (kb)
3696
3697
3698
3699 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3695.609 kb on - strand at 3695.671 kb on - strand at 3695.748 kb on - strand, within Echvi_3094 at 3695.758 kb on - strand, within Echvi_3094 at 3695.759 kb on + strand, within Echvi_3094 at 3695.804 kb on - strand, within Echvi_3094 at 3695.810 kb on + strand, within Echvi_3094 at 3695.810 kb on + strand, within Echvi_3094 at 3695.812 kb on + strand, within Echvi_3094 at 3695.812 kb on + strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.813 kb on - strand, within Echvi_3094 at 3695.842 kb on + strand, within Echvi_3094 at 3695.842 kb on + strand, within Echvi_3094 at 3695.842 kb on + strand, within Echvi_3094 at 3695.843 kb on - strand, within Echvi_3094 at 3695.843 kb on - strand, within Echvi_3094 at 3695.871 kb on - strand, within Echvi_3094 at 3695.871 kb on - strand, within Echvi_3094 at 3695.939 kb on + strand, within Echvi_3094 at 3695.939 kb on + strand, within Echvi_3094 at 3695.940 kb on - strand, within Echvi_3094 at 3695.965 kb on + strand, within Echvi_3094 at 3696.032 kb on - strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.033 kb on + strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.034 kb on - strand, within Echvi_3094 at 3696.038 kb on + strand, within Echvi_3094 at 3696.038 kb on + strand, within Echvi_3094 at 3696.038 kb on + strand, within Echvi_3094 at 3696.227 kb on + strand, within Echvi_3094 at 3696.276 kb on + strand at 3696.277 kb on - strand at 3696.285 kb on + strand at 3696.285 kb on + strand at 3696.321 kb on - strand at 3696.321 kb on - strand at 3696.330 kb on - strand at 3696.357 kb on - strand at 3696.357 kb on - strand at 3696.357 kb on - strand at 3696.409 kb on + strand at 3696.410 kb on - strand at 3696.437 kb on - strand at 3696.437 kb on - strand at 3696.438 kb on + strand at 3696.441 kb on + strand at 3696.479 kb on + strand at 3696.480 kb on - strand at 3696.488 kb on + strand at 3696.488 kb on + strand at 3696.489 kb on - strand at 3696.498 kb on - strand at 3696.498 kb on - strand at 3696.549 kb on + strand at 3696.581 kb on - strand at 3696.626 kb on - strand at 3696.637 kb on + strand at 3696.637 kb on + strand at 3696.657 kb on - strand, within Echvi_3095 at 3696.668 kb on - strand, within Echvi_3095 at 3696.700 kb on + strand, within Echvi_3095 at 3696.701 kb on - strand, within Echvi_3095 at 3696.755 kb on - strand, within Echvi_3095 at 3696.796 kb on + strand, within Echvi_3095 at 3696.796 kb on + strand, within Echvi_3095 at 3696.796 kb on + strand, within Echvi_3095 at 3696.797 kb on - strand, within Echvi_3095 at 3696.809 kb on - strand, within Echvi_3095 at 3696.809 kb on - strand, within Echvi_3095 at 3696.823 kb on - strand, within Echvi_3095 at 3696.847 kb on + strand, within Echvi_3095 at 3696.847 kb on + strand, within Echvi_3095 at 3696.871 kb on - strand, within Echvi_3095 at 3696.944 kb on + strand, within Echvi_3095 at 3696.975 kb on - strand, within Echvi_3095 at 3696.977 kb on + strand, within Echvi_3095 at 3696.977 kb on + strand, within Echvi_3095 at 3696.978 kb on - strand, within Echvi_3095 at 3696.978 kb on - strand, within Echvi_3095 at 3696.978 kb on - strand, within Echvi_3095 at 3697.026 kb on - strand, within Echvi_3095 at 3697.087 kb on + strand, within Echvi_3095 at 3697.088 kb on - strand, within Echvi_3095 at 3697.096 kb on + strand, within Echvi_3095 at 3697.096 kb on + strand, within Echvi_3095 at 3697.097 kb on - strand, within Echvi_3095 at 3697.106 kb on + strand, within Echvi_3095 at 3697.107 kb on - strand, within Echvi_3095 at 3697.107 kb on - strand, within Echvi_3095 at 3697.165 kb on + strand, within Echvi_3095 at 3697.166 kb on - strand, within Echvi_3095 at 3697.197 kb on + strand, within Echvi_3095 at 3697.208 kb on + strand, within Echvi_3095 at 3697.209 kb on - strand, within Echvi_3095 at 3697.210 kb on + strand, within Echvi_3095 at 3697.283 kb on - strand, within Echvi_3095 at 3697.283 kb on - strand, within Echvi_3095 at 3697.287 kb on + strand, within Echvi_3095 at 3697.349 kb on + strand, within Echvi_3095 at 3697.350 kb on - strand, within Echvi_3095 at 3697.354 kb on + strand, within Echvi_3095 at 3697.354 kb on + strand, within Echvi_3095 at 3697.404 kb on + strand, within Echvi_3095 at 3697.405 kb on - strand, within Echvi_3095 at 3697.405 kb on - strand, within Echvi_3095 at 3697.405 kb on - strand, within Echvi_3095 at 3697.407 kb on - strand, within Echvi_3095 at 3697.407 kb on - strand, within Echvi_3095 at 3697.418 kb on - strand, within Echvi_3095 at 3697.472 kb on + strand, within Echvi_3095 at 3697.473 kb on - strand, within Echvi_3095 at 3697.481 kb on + strand, within Echvi_3095 at 3697.481 kb on + strand, within Echvi_3095 at 3697.482 kb on - strand, within Echvi_3095 at 3697.483 kb on + strand, within Echvi_3095 at 3697.484 kb on - strand, within Echvi_3095 at 3697.493 kb on + strand, within Echvi_3095 at 3697.494 kb on - strand, within Echvi_3095 at 3697.544 kb on + strand, within Echvi_3095 at 3697.544 kb on + strand, within Echvi_3095 at 3697.587 kb on - strand, within Echvi_3095 at 3697.588 kb on + strand, within Echvi_3095 at 3697.588 kb on + strand at 3697.589 kb on - strand, within Echvi_3095 at 3697.589 kb on - strand, within Echvi_3095 at 3697.642 kb on + strand, within Echvi_3095 at 3697.643 kb on - strand, within Echvi_3095 at 3697.643 kb on - strand, within Echvi_3095 at 3697.643 kb on - strand, within Echvi_3095 at 3697.646 kb on + strand, within Echvi_3095 at 3697.647 kb on - strand, within Echvi_3095 at 3697.715 kb on - strand, within Echvi_3095 at 3697.850 kb on + strand, within Echvi_3095 at 3697.854 kb on - strand, within Echvi_3095 at 3697.854 kb on - strand, within Echvi_3095 at 3697.859 kb on + strand, within Echvi_3095 at 3697.859 kb on + strand, within Echvi_3095 at 3697.859 kb on + strand, within Echvi_3095 at 3697.860 kb on - strand, within Echvi_3095 at 3697.860 kb on - strand, within Echvi_3095 at 3697.863 kb on - strand, within Echvi_3095 at 3697.941 kb on - strand, within Echvi_3095 at 3697.964 kb on + strand at 3697.965 kb on - strand at 3698.028 kb on + strand at 3698.028 kb on + strand at 3698.073 kb on - strand at 3698.121 kb on + strand at 3698.121 kb on + strand at 3698.217 kb on - strand at 3699.010 kb on - strand at 3699.012 kb on - strand at 3699.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 3,695,609 - -1.5 3,695,671 - +1.5 3,695,748 - Echvi_3094 0.17 +1.5 3,695,758 - Echvi_3094 0.18 -2.2 3,695,759 + Echvi_3094 0.18 -1.2 3,695,804 - Echvi_3094 0.25 +0.4 3,695,810 + Echvi_3094 0.26 -0.0 3,695,810 + Echvi_3094 0.26 -1.3 3,695,812 + Echvi_3094 0.26 -0.7 3,695,812 + Echvi_3094 0.26 -0.6 3,695,813 - Echvi_3094 0.26 +0.5 3,695,813 - Echvi_3094 0.26 +1.5 3,695,813 - Echvi_3094 0.26 -0.9 3,695,813 - Echvi_3094 0.26 +0.4 3,695,842 + Echvi_3094 0.30 +0.1 3,695,842 + Echvi_3094 0.30 -0.4 3,695,842 + Echvi_3094 0.30 -0.5 3,695,843 - Echvi_3094 0.30 +1.1 3,695,843 - Echvi_3094 0.30 +0.4 3,695,871 - Echvi_3094 0.34 -0.2 3,695,871 - Echvi_3094 0.34 -0.9 3,695,939 + Echvi_3094 0.44 -1.2 3,695,939 + Echvi_3094 0.44 +0.3 3,695,940 - Echvi_3094 0.44 +2.4 3,695,965 + Echvi_3094 0.48 +0.6 3,696,032 - Echvi_3094 0.57 -1.4 3,696,033 + Echvi_3094 0.57 +0.4 3,696,033 + Echvi_3094 0.57 +0.1 3,696,033 + Echvi_3094 0.57 -0.5 3,696,033 + Echvi_3094 0.57 +0.6 3,696,034 - Echvi_3094 0.57 +0.1 3,696,034 - Echvi_3094 0.57 -0.7 3,696,034 - Echvi_3094 0.57 +0.3 3,696,034 - Echvi_3094 0.57 -1.1 3,696,034 - Echvi_3094 0.57 -0.4 3,696,038 + Echvi_3094 0.58 -0.8 3,696,038 + Echvi_3094 0.58 +0.9 3,696,038 + Echvi_3094 0.58 -0.4 3,696,227 + Echvi_3094 0.85 +0.1 3,696,276 + -1.0 3,696,277 - +1.6 3,696,285 + -0.1 3,696,285 + -1.8 3,696,321 - -1.7 3,696,321 - -0.6 3,696,330 - -1.3 3,696,357 - -0.2 3,696,357 - +0.4 3,696,357 - +0.9 3,696,409 + +0.2 3,696,410 - +1.1 3,696,437 - -1.7 3,696,437 - -0.5 3,696,438 + +0.1 3,696,441 + +0.5 3,696,479 + -0.3 3,696,480 - -1.2 3,696,488 + +0.8 3,696,488 + -2.0 3,696,489 - -1.1 3,696,498 - +1.8 3,696,498 - -0.5 3,696,549 + -0.9 3,696,581 - -0.4 3,696,626 - -0.1 3,696,637 + +0.1 3,696,637 + -0.6 3,696,657 - Echvi_3095 0.10 +0.5 3,696,668 - Echvi_3095 0.11 +0.6 3,696,700 + Echvi_3095 0.13 -0.8 3,696,701 - Echvi_3095 0.13 -0.2 3,696,755 - Echvi_3095 0.16 -0.8 3,696,796 + Echvi_3095 0.19 -0.8 3,696,796 + Echvi_3095 0.19 -1.1 3,696,796 + Echvi_3095 0.19 -1.2 3,696,797 - Echvi_3095 0.19 -0.4 3,696,809 - Echvi_3095 0.20 -1.3 3,696,809 - Echvi_3095 0.20 +0.5 3,696,823 - Echvi_3095 0.20 -0.3 3,696,847 + Echvi_3095 0.22 -0.6 3,696,847 + Echvi_3095 0.22 -0.7 3,696,871 - Echvi_3095 0.23 -0.4 3,696,944 + Echvi_3095 0.28 -1.2 3,696,975 - Echvi_3095 0.30 +0.4 3,696,977 + Echvi_3095 0.30 +1.0 3,696,977 + Echvi_3095 0.30 -0.3 3,696,978 - Echvi_3095 0.30 -0.8 3,696,978 - Echvi_3095 0.30 +0.1 3,696,978 - Echvi_3095 0.30 +0.2 3,697,026 - Echvi_3095 0.33 -0.7 3,697,087 + Echvi_3095 0.37 +0.1 3,697,088 - Echvi_3095 0.37 +0.6 3,697,096 + Echvi_3095 0.37 +0.1 3,697,096 + Echvi_3095 0.37 -0.3 3,697,097 - Echvi_3095 0.37 +1.6 3,697,106 + Echvi_3095 0.38 +1.1 3,697,107 - Echvi_3095 0.38 +0.1 3,697,107 - Echvi_3095 0.38 +0.6 3,697,165 + Echvi_3095 0.42 -0.3 3,697,166 - Echvi_3095 0.42 +1.3 3,697,197 + Echvi_3095 0.44 -1.4 3,697,208 + Echvi_3095 0.44 -0.1 3,697,209 - Echvi_3095 0.44 -0.6 3,697,210 + Echvi_3095 0.44 +0.2 3,697,283 - Echvi_3095 0.49 +0.2 3,697,283 - Echvi_3095 0.49 -0.9 3,697,287 + Echvi_3095 0.49 +2.5 3,697,349 + Echvi_3095 0.53 -1.6 3,697,350 - Echvi_3095 0.53 -0.5 3,697,354 + Echvi_3095 0.53 +0.5 3,697,354 + Echvi_3095 0.53 +0.3 3,697,404 + Echvi_3095 0.56 -0.6 3,697,405 - Echvi_3095 0.57 -1.3 3,697,405 - Echvi_3095 0.57 -1.8 3,697,405 - Echvi_3095 0.57 +0.9 3,697,407 - Echvi_3095 0.57 -1.6 3,697,407 - Echvi_3095 0.57 -2.7 3,697,418 - Echvi_3095 0.57 -0.6 3,697,472 + Echvi_3095 0.61 +1.3 3,697,473 - Echvi_3095 0.61 +1.6 3,697,481 + Echvi_3095 0.61 -0.6 3,697,481 + Echvi_3095 0.61 +0.5 3,697,482 - Echvi_3095 0.61 +1.7 3,697,483 + Echvi_3095 0.61 -0.5 3,697,484 - Echvi_3095 0.61 +2.1 3,697,493 + Echvi_3095 0.62 -0.9 3,697,494 - Echvi_3095 0.62 -0.5 3,697,544 + Echvi_3095 0.65 -1.7 3,697,544 + Echvi_3095 0.65 -0.2 3,697,587 - Echvi_3095 0.68 -0.3 3,697,588 + Echvi_3095 0.68 +0.5 3,697,588 + -0.3 3,697,589 - Echvi_3095 0.68 +0.4 3,697,589 - Echvi_3095 0.68 +0.3 3,697,642 + Echvi_3095 0.71 -0.1 3,697,643 - Echvi_3095 0.71 +0.2 3,697,643 - Echvi_3095 0.71 -0.0 3,697,643 - Echvi_3095 0.71 +0.4 3,697,646 + Echvi_3095 0.72 +1.1 3,697,647 - Echvi_3095 0.72 -1.9 3,697,715 - Echvi_3095 0.76 -0.2 3,697,850 + Echvi_3095 0.84 -1.6 3,697,854 - Echvi_3095 0.84 +0.3 3,697,854 - Echvi_3095 0.84 +0.3 3,697,859 + Echvi_3095 0.85 -0.1 3,697,859 + Echvi_3095 0.85 -0.0 3,697,859 + Echvi_3095 0.85 +1.4 3,697,860 - Echvi_3095 0.85 +0.3 3,697,860 - Echvi_3095 0.85 +0.0 3,697,863 - Echvi_3095 0.85 +0.0 3,697,941 - Echvi_3095 0.90 -0.8 3,697,964 + -2.5 3,697,965 - +0.1 3,698,028 + +2.1 3,698,028 + +0.4 3,698,073 - -0.7 3,698,121 + +1.4 3,698,121 + +0.3 3,698,217 - +0.2 3,699,010 - -1.2 3,699,012 - +0.8 3,699,012 - +1.4
Or see this region's nucleotide sequence