Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2637 and Echvi_2638 are separated by 86 nucleotides Echvi_2638 and Echvi_2639 are separated by 227 nucleotides
Echvi_2637: Echvi_2637 - Predicted esterase of the alpha-beta hydrolase superfamily, at 3,125,516 to 3,127,858
_2637
Echvi_2638: Echvi_2638 - hypothetical protein, at 3,127,945 to 3,128,973
_2638
Echvi_2639: Echvi_2639 - Predicted membrane-associated Zn-dependent proteases 1, at 3,129,201 to 3,130,307
_2639
Position (kb)
3127
3128
3129 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3127.010 kb on - strand, within Echvi_2637 at 3127.012 kb on - strand, within Echvi_2637 at 3127.012 kb on - strand, within Echvi_2637 at 3127.071 kb on - strand, within Echvi_2637 at 3127.071 kb on - strand, within Echvi_2637 at 3127.099 kb on + strand, within Echvi_2637 at 3127.099 kb on + strand, within Echvi_2637 at 3127.100 kb on - strand, within Echvi_2637 at 3127.102 kb on + strand, within Echvi_2637 at 3127.103 kb on - strand, within Echvi_2637 at 3127.103 kb on - strand, within Echvi_2637 at 3127.133 kb on + strand, within Echvi_2637 at 3127.134 kb on - strand, within Echvi_2637 at 3127.134 kb on - strand, within Echvi_2637 at 3127.136 kb on + strand, within Echvi_2637 at 3127.137 kb on - strand, within Echvi_2637 at 3127.137 kb on - strand, within Echvi_2637 at 3127.138 kb on + strand, within Echvi_2637 at 3127.138 kb on + strand, within Echvi_2637 at 3127.138 kb on + strand, within Echvi_2637 at 3127.138 kb on + strand, within Echvi_2637 at 3127.139 kb on - strand, within Echvi_2637 at 3127.142 kb on + strand, within Echvi_2637 at 3127.142 kb on + strand, within Echvi_2637 at 3127.142 kb on + strand, within Echvi_2637 at 3127.142 kb on + strand, within Echvi_2637 at 3127.142 kb on + strand, within Echvi_2637 at 3127.143 kb on - strand, within Echvi_2637 at 3127.165 kb on + strand, within Echvi_2637 at 3127.193 kb on + strand, within Echvi_2637 at 3127.193 kb on + strand, within Echvi_2637 at 3127.198 kb on + strand, within Echvi_2637 at 3127.242 kb on - strand, within Echvi_2637 at 3127.242 kb on - strand, within Echvi_2637 at 3127.263 kb on + strand, within Echvi_2637 at 3127.264 kb on - strand, within Echvi_2637 at 3127.354 kb on + strand, within Echvi_2637 at 3127.355 kb on - strand, within Echvi_2637 at 3127.372 kb on - strand, within Echvi_2637 at 3127.379 kb on + strand, within Echvi_2637 at 3127.379 kb on + strand, within Echvi_2637 at 3127.380 kb on - strand, within Echvi_2637 at 3127.388 kb on + strand, within Echvi_2637 at 3127.432 kb on + strand, within Echvi_2637 at 3127.432 kb on + strand, within Echvi_2637 at 3127.437 kb on + strand, within Echvi_2637 at 3127.476 kb on - strand at 3127.477 kb on + strand, within Echvi_2637 at 3127.477 kb on + strand, within Echvi_2637 at 3127.477 kb on + strand, within Echvi_2637 at 3127.478 kb on - strand, within Echvi_2637 at 3127.478 kb on - strand, within Echvi_2637 at 3127.478 kb on - strand, within Echvi_2637 at 3127.478 kb on - strand, within Echvi_2637 at 3127.481 kb on + strand, within Echvi_2637 at 3127.481 kb on + strand, within Echvi_2637 at 3127.481 kb on + strand, within Echvi_2637 at 3127.484 kb on - strand, within Echvi_2637 at 3127.528 kb on + strand, within Echvi_2637 at 3127.585 kb on - strand, within Echvi_2637 at 3127.715 kb on - strand at 3127.715 kb on - strand at 3127.730 kb on + strand at 3127.795 kb on + strand at 3127.795 kb on + strand at 3127.841 kb on - strand at 3127.876 kb on - strand at 3127.891 kb on + strand at 3127.891 kb on + strand at 3127.891 kb on + strand at 3127.891 kb on + strand at 3127.891 kb on + strand at 3127.892 kb on - strand at 3127.909 kb on + strand at 3127.910 kb on - strand at 3127.910 kb on - strand at 3127.910 kb on - strand at 3127.913 kb on - strand at 3127.929 kb on + strand at 3127.929 kb on + strand at 3127.986 kb on + strand at 3127.987 kb on - strand at 3127.988 kb on + strand at 3127.989 kb on - strand at 3127.998 kb on - strand at 3128.031 kb on + strand at 3128.032 kb on - strand at 3128.156 kb on - strand, within Echvi_2638 at 3128.183 kb on + strand, within Echvi_2638 at 3128.184 kb on - strand, within Echvi_2638 at 3128.184 kb on - strand, within Echvi_2638 at 3128.215 kb on - strand, within Echvi_2638 at 3128.215 kb on - strand, within Echvi_2638 at 3128.248 kb on + strand, within Echvi_2638 at 3128.249 kb on - strand, within Echvi_2638 at 3128.347 kb on + strand, within Echvi_2638 at 3128.347 kb on + strand, within Echvi_2638 at 3128.347 kb on + strand, within Echvi_2638 at 3128.348 kb on - strand, within Echvi_2638 at 3128.388 kb on + strand, within Echvi_2638 at 3128.389 kb on - strand, within Echvi_2638 at 3128.389 kb on - strand, within Echvi_2638 at 3128.457 kb on + strand, within Echvi_2638 at 3128.458 kb on - strand, within Echvi_2638 at 3128.458 kb on - strand, within Echvi_2638 at 3128.458 kb on - strand, within Echvi_2638 at 3128.493 kb on - strand, within Echvi_2638 at 3128.547 kb on + strand, within Echvi_2638 at 3128.573 kb on - strand, within Echvi_2638 at 3128.590 kb on - strand, within Echvi_2638 at 3128.713 kb on + strand, within Echvi_2638 at 3128.713 kb on + strand, within Echvi_2638 at 3128.713 kb on + strand, within Echvi_2638 at 3128.713 kb on + strand, within Echvi_2638 at 3128.713 kb on + strand, within Echvi_2638 at 3128.714 kb on - strand, within Echvi_2638 at 3128.719 kb on - strand, within Echvi_2638 at 3128.723 kb on + strand, within Echvi_2638 at 3128.723 kb on + strand, within Echvi_2638 at 3128.724 kb on - strand, within Echvi_2638 at 3128.724 kb on - strand, within Echvi_2638 at 3128.795 kb on - strand, within Echvi_2638 at 3128.839 kb on + strand, within Echvi_2638 at 3128.839 kb on + strand, within Echvi_2638 at 3128.840 kb on - strand, within Echvi_2638 at 3128.841 kb on + strand, within Echvi_2638 at 3129.035 kb on - strand at 3129.151 kb on + strand at 3129.152 kb on - strand at 3129.152 kb on - strand at 3129.159 kb on + strand at 3129.212 kb on + strand at 3129.245 kb on + strand at 3129.246 kb on - strand at 3129.349 kb on + strand, within Echvi_2639 at 3129.349 kb on + strand, within Echvi_2639 at 3129.349 kb on + strand, within Echvi_2639 at 3129.355 kb on - strand, within Echvi_2639 at 3129.401 kb on + strand, within Echvi_2639 at 3129.401 kb on + strand, within Echvi_2639 at 3129.402 kb on - strand, within Echvi_2639 at 3129.408 kb on + strand, within Echvi_2639 at 3129.477 kb on - strand, within Echvi_2639 at 3129.477 kb on - strand, within Echvi_2639 at 3129.477 kb on - strand, within Echvi_2639 at 3129.478 kb on + strand, within Echvi_2639 at 3129.479 kb on - strand, within Echvi_2639 at 3129.479 kb on - strand, within Echvi_2639 at 3129.482 kb on + strand, within Echvi_2639 at 3129.483 kb on - strand, within Echvi_2639 at 3129.483 kb on - strand, within Echvi_2639 at 3129.494 kb on - strand, within Echvi_2639 at 3129.494 kb on - strand, within Echvi_2639 at 3129.494 kb on - strand, within Echvi_2639 at 3129.494 kb on - strand, within Echvi_2639 at 3129.494 kb on - strand, within Echvi_2639 at 3129.495 kb on + strand, within Echvi_2639 at 3129.517 kb on + strand, within Echvi_2639 at 3129.518 kb on - strand, within Echvi_2639 at 3129.518 kb on - strand, within Echvi_2639 at 3129.518 kb on - strand, within Echvi_2639 at 3129.532 kb on + strand, within Echvi_2639 at 3129.533 kb on - strand, within Echvi_2639 at 3129.564 kb on + strand, within Echvi_2639 at 3129.565 kb on - strand, within Echvi_2639 at 3129.566 kb on + strand, within Echvi_2639 at 3129.567 kb on - strand, within Echvi_2639 at 3129.575 kb on + strand, within Echvi_2639 at 3129.624 kb on + strand, within Echvi_2639 at 3129.626 kb on + strand, within Echvi_2639 at 3129.626 kb on + strand, within Echvi_2639 at 3129.627 kb on - strand, within Echvi_2639 at 3129.627 kb on - strand, within Echvi_2639 at 3129.702 kb on + strand, within Echvi_2639 at 3129.702 kb on + strand, within Echvi_2639 at 3129.703 kb on - strand, within Echvi_2639 at 3129.731 kb on + strand, within Echvi_2639 at 3129.775 kb on + strand, within Echvi_2639 at 3129.775 kb on + strand, within Echvi_2639 at 3129.775 kb on + strand, within Echvi_2639 at 3129.775 kb on + strand, within Echvi_2639 at 3129.776 kb on - strand, within Echvi_2639 at 3129.776 kb on - strand, within Echvi_2639 at 3129.776 kb on - strand, within Echvi_2639 at 3129.847 kb on + strand, within Echvi_2639 at 3129.907 kb on - strand, within Echvi_2639 at 3129.916 kb on - strand, within Echvi_2639
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 3,127,010 - Echvi_2637 0.64 +0.6 3,127,012 - Echvi_2637 0.64 -0.6 3,127,012 - Echvi_2637 0.64 -0.8 3,127,071 - Echvi_2637 0.66 +0.8 3,127,071 - Echvi_2637 0.66 +0.5 3,127,099 + Echvi_2637 0.68 -2.0 3,127,099 + Echvi_2637 0.68 -1.5 3,127,100 - Echvi_2637 0.68 +0.1 3,127,102 + Echvi_2637 0.68 +1.2 3,127,103 - Echvi_2637 0.68 -3.2 3,127,103 - Echvi_2637 0.68 -0.1 3,127,133 + Echvi_2637 0.69 +0.2 3,127,134 - Echvi_2637 0.69 -0.8 3,127,134 - Echvi_2637 0.69 -0.0 3,127,136 + Echvi_2637 0.69 -1.6 3,127,137 - Echvi_2637 0.69 -0.3 3,127,137 - Echvi_2637 0.69 -0.7 3,127,138 + Echvi_2637 0.69 +0.5 3,127,138 + Echvi_2637 0.69 -0.7 3,127,138 + Echvi_2637 0.69 +0.4 3,127,138 + Echvi_2637 0.69 -1.3 3,127,139 - Echvi_2637 0.69 -0.1 3,127,142 + Echvi_2637 0.69 -1.3 3,127,142 + Echvi_2637 0.69 +0.3 3,127,142 + Echvi_2637 0.69 -0.6 3,127,142 + Echvi_2637 0.69 +0.8 3,127,142 + Echvi_2637 0.69 +0.3 3,127,143 - Echvi_2637 0.69 +0.4 3,127,165 + Echvi_2637 0.70 -0.3 3,127,193 + Echvi_2637 0.72 -0.7 3,127,193 + Echvi_2637 0.72 +0.5 3,127,198 + Echvi_2637 0.72 +0.7 3,127,242 - Echvi_2637 0.74 -0.9 3,127,242 - Echvi_2637 0.74 -0.1 3,127,263 + Echvi_2637 0.75 +1.5 3,127,264 - Echvi_2637 0.75 -0.0 3,127,354 + Echvi_2637 0.78 -0.0 3,127,355 - Echvi_2637 0.78 -0.2 3,127,372 - Echvi_2637 0.79 +1.6 3,127,379 + Echvi_2637 0.80 -0.8 3,127,379 + Echvi_2637 0.80 +0.5 3,127,380 - Echvi_2637 0.80 -0.4 3,127,388 + Echvi_2637 0.80 -1.1 3,127,432 + Echvi_2637 0.82 -0.1 3,127,432 + Echvi_2637 0.82 -1.0 3,127,437 + Echvi_2637 0.82 -0.1 3,127,476 - +2.1 3,127,477 + Echvi_2637 0.84 -1.8 3,127,477 + Echvi_2637 0.84 +0.6 3,127,477 + Echvi_2637 0.84 +0.5 3,127,478 - Echvi_2637 0.84 -0.0 3,127,478 - Echvi_2637 0.84 +0.8 3,127,478 - Echvi_2637 0.84 -0.1 3,127,478 - Echvi_2637 0.84 +1.1 3,127,481 + Echvi_2637 0.84 -0.0 3,127,481 + Echvi_2637 0.84 -0.3 3,127,481 + Echvi_2637 0.84 -0.3 3,127,484 - Echvi_2637 0.84 -1.8 3,127,528 + Echvi_2637 0.86 -1.0 3,127,585 - Echvi_2637 0.88 -1.6 3,127,715 - +1.0 3,127,715 - -1.2 3,127,730 + -0.8 3,127,795 + -1.6 3,127,795 + -0.3 3,127,841 - +0.8 3,127,876 - +0.8 3,127,891 + -0.1 3,127,891 + +0.2 3,127,891 + +0.2 3,127,891 + -0.1 3,127,891 + +0.9 3,127,892 - -2.1 3,127,909 + -1.0 3,127,910 - -2.8 3,127,910 - -1.5 3,127,910 - -0.5 3,127,913 - +2.5 3,127,929 + +0.3 3,127,929 + -2.2 3,127,986 + -1.1 3,127,987 - -0.4 3,127,988 + -0.6 3,127,989 - +0.2 3,127,998 - -0.9 3,128,031 + -0.2 3,128,032 - -0.2 3,128,156 - Echvi_2638 0.21 +0.4 3,128,183 + Echvi_2638 0.23 +0.2 3,128,184 - Echvi_2638 0.23 -1.6 3,128,184 - Echvi_2638 0.23 -0.4 3,128,215 - Echvi_2638 0.26 +1.3 3,128,215 - Echvi_2638 0.26 -1.0 3,128,248 + Echvi_2638 0.29 +0.1 3,128,249 - Echvi_2638 0.30 -0.3 3,128,347 + Echvi_2638 0.39 -1.7 3,128,347 + Echvi_2638 0.39 +0.3 3,128,347 + Echvi_2638 0.39 +0.2 3,128,348 - Echvi_2638 0.39 +0.2 3,128,388 + Echvi_2638 0.43 -2.1 3,128,389 - Echvi_2638 0.43 -0.1 3,128,389 - Echvi_2638 0.43 +0.3 3,128,457 + Echvi_2638 0.50 -1.5 3,128,458 - Echvi_2638 0.50 -0.4 3,128,458 - Echvi_2638 0.50 +1.1 3,128,458 - Echvi_2638 0.50 -0.9 3,128,493 - Echvi_2638 0.53 +0.9 3,128,547 + Echvi_2638 0.59 +0.5 3,128,573 - Echvi_2638 0.61 +0.4 3,128,590 - Echvi_2638 0.63 -1.3 3,128,713 + Echvi_2638 0.75 +0.4 3,128,713 + Echvi_2638 0.75 -0.5 3,128,713 + Echvi_2638 0.75 +0.2 3,128,713 + Echvi_2638 0.75 -0.3 3,128,713 + Echvi_2638 0.75 -0.1 3,128,714 - Echvi_2638 0.75 -0.5 3,128,719 - Echvi_2638 0.75 +0.5 3,128,723 + Echvi_2638 0.76 -0.1 3,128,723 + Echvi_2638 0.76 -2.5 3,128,724 - Echvi_2638 0.76 -2.3 3,128,724 - Echvi_2638 0.76 +1.5 3,128,795 - Echvi_2638 0.83 +0.8 3,128,839 + Echvi_2638 0.87 +0.0 3,128,839 + Echvi_2638 0.87 +2.1 3,128,840 - Echvi_2638 0.87 -0.8 3,128,841 + Echvi_2638 0.87 +1.3 3,129,035 - -0.8 3,129,151 + -1.9 3,129,152 - +1.7 3,129,152 - -0.5 3,129,159 + +0.5 3,129,212 + -1.2 3,129,245 + -0.6 3,129,246 - -1.5 3,129,349 + Echvi_2639 0.13 +2.3 3,129,349 + Echvi_2639 0.13 +0.4 3,129,349 + Echvi_2639 0.13 +1.4 3,129,355 - Echvi_2639 0.14 -1.0 3,129,401 + Echvi_2639 0.18 -0.5 3,129,401 + Echvi_2639 0.18 +0.4 3,129,402 - Echvi_2639 0.18 +1.7 3,129,408 + Echvi_2639 0.19 +1.7 3,129,477 - Echvi_2639 0.25 +0.9 3,129,477 - Echvi_2639 0.25 -1.5 3,129,477 - Echvi_2639 0.25 +0.1 3,129,478 + Echvi_2639 0.25 +1.3 3,129,479 - Echvi_2639 0.25 +0.6 3,129,479 - Echvi_2639 0.25 +0.3 3,129,482 + Echvi_2639 0.25 +0.6 3,129,483 - Echvi_2639 0.25 +0.2 3,129,483 - Echvi_2639 0.25 -1.2 3,129,494 - Echvi_2639 0.26 +0.4 3,129,494 - Echvi_2639 0.26 -0.8 3,129,494 - Echvi_2639 0.26 -0.5 3,129,494 - Echvi_2639 0.26 -0.4 3,129,494 - Echvi_2639 0.26 -1.7 3,129,495 + Echvi_2639 0.27 -0.8 3,129,517 + Echvi_2639 0.29 -0.7 3,129,518 - Echvi_2639 0.29 -2.6 3,129,518 - Echvi_2639 0.29 +0.5 3,129,518 - Echvi_2639 0.29 +0.1 3,129,532 + Echvi_2639 0.30 -1.3 3,129,533 - Echvi_2639 0.30 -1.5 3,129,564 + Echvi_2639 0.33 +0.8 3,129,565 - Echvi_2639 0.33 +0.5 3,129,566 + Echvi_2639 0.33 +1.0 3,129,567 - Echvi_2639 0.33 -0.4 3,129,575 + Echvi_2639 0.34 -1.1 3,129,624 + Echvi_2639 0.38 -0.6 3,129,626 + Echvi_2639 0.38 +0.1 3,129,626 + Echvi_2639 0.38 +0.3 3,129,627 - Echvi_2639 0.38 +0.5 3,129,627 - Echvi_2639 0.38 -0.9 3,129,702 + Echvi_2639 0.45 -0.6 3,129,702 + Echvi_2639 0.45 +1.2 3,129,703 - Echvi_2639 0.45 -1.0 3,129,731 + Echvi_2639 0.48 +0.1 3,129,775 + Echvi_2639 0.52 -0.9 3,129,775 + Echvi_2639 0.52 +0.7 3,129,775 + Echvi_2639 0.52 -0.3 3,129,775 + Echvi_2639 0.52 +0.2 3,129,776 - Echvi_2639 0.52 -0.5 3,129,776 - Echvi_2639 0.52 +1.5 3,129,776 - Echvi_2639 0.52 -0.1 3,129,847 + Echvi_2639 0.58 +1.2 3,129,907 - Echvi_2639 0.64 -1.9 3,129,916 - Echvi_2639 0.65 -0.0
Or see this region's nucleotide sequence