Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0649 and Echvi_0650 are separated by 280 nucleotides Echvi_0650 and Echvi_0651 are separated by 518 nucleotides
Echvi_0649: Echvi_0649 - Transposase and inactivated derivatives, at 733,027 to 734,085
_0649
Echvi_0650: Echvi_0650 - thioredoxin, at 734,366 to 734,671
_0650
Echvi_0651: Echvi_0651 - Outer membrane protein, at 735,190 to 735,750
_0651
Position (kb) 734
735 Strain fitness (log2 ratio) -2
-1
0
1
2 at 734.163 kb on - strand at 734.328 kb on + strand at 734.380 kb on + strand at 734.488 kb on - strand, within Echvi_0650 at 734.516 kb on + strand, within Echvi_0650 at 734.516 kb on + strand, within Echvi_0650 at 734.536 kb on + strand, within Echvi_0650 at 734.567 kb on + strand, within Echvi_0650 at 734.567 kb on + strand, within Echvi_0650 at 734.676 kb on - strand at 734.714 kb on - strand at 734.716 kb on + strand at 734.836 kb on + strand at 734.836 kb on + strand at 734.917 kb on + strand at 734.926 kb on + strand at 734.926 kb on + strand at 734.926 kb on + strand at 734.927 kb on - strand at 734.929 kb on + strand at 734.930 kb on - strand at 734.930 kb on - strand at 734.930 kb on - strand at 734.940 kb on + strand at 734.980 kb on + strand at 734.980 kb on + strand at 734.980 kb on + strand at 734.981 kb on - strand at 734.981 kb on - strand at 734.991 kb on - strand at 734.991 kb on - strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.032 kb on + strand at 735.033 kb on - strand at 735.039 kb on + strand at 735.039 kb on + strand at 735.040 kb on - strand at 735.043 kb on + strand at 735.055 kb on + strand at 735.055 kb on + strand at 735.061 kb on - strand at 735.175 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 734,163 - -0.6 734,328 + +1.8 734,380 + -0.2 734,488 - Echvi_0650 0.40 +1.1 734,516 + Echvi_0650 0.49 -0.8 734,516 + Echvi_0650 0.49 -0.9 734,536 + Echvi_0650 0.56 -0.4 734,567 + Echvi_0650 0.66 -1.3 734,567 + Echvi_0650 0.66 -1.9 734,676 - +0.1 734,714 - +1.4 734,716 + -0.2 734,836 + +0.9 734,836 + +0.1 734,917 + +0.2 734,926 + +1.0 734,926 + -0.6 734,926 + +0.4 734,927 - -0.2 734,929 + +0.8 734,930 - -2.0 734,930 - +0.7 734,930 - -1.6 734,940 + -1.3 734,980 + -1.3 734,980 + -1.1 734,980 + -0.9 734,981 - +1.4 734,981 - +0.2 734,991 - +1.3 734,991 - -1.8 735,032 + +0.3 735,032 + +1.4 735,032 + +0.5 735,032 + -0.7 735,033 - +1.6 735,039 + -0.4 735,039 + -1.6 735,040 - +2.0 735,043 + -0.9 735,055 + +0.7 735,055 + -0.8 735,061 - -0.8 735,175 + -0.9
Or see this region's nucleotide sequence