Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28010 and PS417_28015 are separated by 37 nucleotides PS417_28015 and PS417_28020 are separated by 196 nucleotides PS417_28020 and PS417_28025 overlap by 1 nucleotides
PS417_28010: PS417_28010 - pyridine nucleotide-disulfide oxidoreductase, at 6,046,340 to 6,047,488
_28010
PS417_28015: PS417_28015 - rubredoxin, at 6,047,526 to 6,047,693
_28015
PS417_28020: PS417_28020 - chorismate--pyruvate lyase, at 6,047,890 to 6,048,453
_28020
PS417_28025: PS417_28025 - 4-hydroxybenzoate polyprenyltransferase, at 6,048,453 to 6,049,343
_28025
Position (kb)
6047
6048
6049 Strain fitness (log2 ratio)
-1
0
1 at 6047.092 kb on - strand, within PS417_28010 at 6047.367 kb on + strand, within PS417_28010 at 6047.445 kb on + strand at 6047.502 kb on + strand at 6047.503 kb on - strand at 6047.505 kb on + strand at 6047.505 kb on + strand at 6047.505 kb on + strand at 6047.505 kb on + strand at 6047.505 kb on + strand at 6047.506 kb on - strand at 6047.506 kb on - strand at 6047.506 kb on - strand at 6047.506 kb on - strand at 6047.509 kb on + strand at 6047.509 kb on + strand at 6047.509 kb on + strand at 6047.510 kb on - strand at 6047.656 kb on + strand, within PS417_28015 at 6047.656 kb on + strand, within PS417_28015 at 6047.657 kb on - strand, within PS417_28015 at 6047.657 kb on - strand, within PS417_28015 at 6047.657 kb on - strand, within PS417_28015 at 6047.673 kb on + strand, within PS417_28015 at 6047.673 kb on + strand, within PS417_28015 at 6047.694 kb on + strand at 6047.694 kb on + strand at 6047.695 kb on - strand at 6047.699 kb on - strand at 6047.851 kb on + strand at 6047.852 kb on - strand at 6048.136 kb on + strand, within PS417_28020 at 6048.136 kb on + strand, within PS417_28020 at 6048.136 kb on + strand at 6048.137 kb on - strand, within PS417_28020 at 6048.216 kb on + strand, within PS417_28020 at 6048.216 kb on + strand, within PS417_28020 at 6048.456 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 6,047,092 - PS417_28010 0.65 -0.0 6,047,367 + PS417_28010 0.89 +0.4 6,047,445 + +0.5 6,047,502 + +0.4 6,047,503 - -0.1 6,047,505 + +0.1 6,047,505 + -0.1 6,047,505 + -0.7 6,047,505 + -0.4 6,047,505 + -0.4 6,047,506 - -0.5 6,047,506 - -0.1 6,047,506 - +0.7 6,047,506 - -0.3 6,047,509 + +0.1 6,047,509 + -0.9 6,047,509 + +0.4 6,047,510 - +0.2 6,047,656 + PS417_28015 0.77 -0.5 6,047,656 + PS417_28015 0.77 -0.4 6,047,657 - PS417_28015 0.78 +1.2 6,047,657 - PS417_28015 0.78 +0.6 6,047,657 - PS417_28015 0.78 +0.6 6,047,673 + PS417_28015 0.88 -0.4 6,047,673 + PS417_28015 0.88 -0.2 6,047,694 + +0.7 6,047,694 + -0.8 6,047,695 - -0.0 6,047,699 - -1.0 6,047,851 + +0.5 6,047,852 - -0.8 6,048,136 + PS417_28020 0.44 -1.4 6,048,136 + PS417_28020 0.44 -1.5 6,048,136 + +0.5 6,048,137 - PS417_28020 0.44 +0.2 6,048,216 + PS417_28020 0.58 -1.3 6,048,216 + PS417_28020 0.58 +0.3 6,048,456 + -0.2
Or see this region's nucleotide sequence