Strain Fitness in Pseudomonas simiae WCS417 around PS417_27640
Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.03 vol% |
---|---|---|---|---|---|
remove | |||||
5,959,013 | + | PS417_27635 | 0.36 | -0.2 | |
5,959,014 | - | PS417_27635 | 0.37 | +0.8 | |
5,959,048 | - | PS417_27635 | 0.39 | -0.2 | |
5,959,395 | + | PS417_27635 | 0.62 | +0.3 | |
5,959,396 | - | PS417_27635 | 0.62 | -0.1 | |
5,960,418 | - | PS417_27640 | 0.78 | -1.0 | |
5,960,570 | + | -0.2 | |||
5,960,635 | + | +0.2 | |||
5,960,635 | + | -0.5 | |||
5,960,636 | - | +0.2 | |||
5,960,636 | - | -1.2 | |||
5,960,636 | - | +0.5 | |||
5,960,636 | - | +0.1 | |||
5,960,749 | + | PS417_27645 | 0.10 | -0.4 | |
5,960,879 | - | PS417_27645 | 0.24 | -0.6 | |
5,960,879 | - | PS417_27645 | 0.24 | +0.1 | |
5,960,957 | - | PS417_27645 | 0.33 | +1.4 | |
5,961,301 | + | PS417_27645 | 0.70 | -0.8 | |
5,961,355 | + | PS417_27645 | 0.76 | +0.5 | |
5,961,445 | + | PS417_27645 | 0.86 | -0.1 | |
5,961,445 | + | PS417_27645 | 0.86 | +0.0 | |
5,961,446 | - | PS417_27645 | 0.86 | -0.2 | |
5,961,446 | - | PS417_27645 | 0.86 | +0.2 | |
5,961,460 | + | PS417_27645 | 0.88 | +0.0 | |
5,961,460 | + | PS417_27645 | 0.88 | -0.2 | |
5,961,461 | - | PS417_27645 | 0.88 | +0.3 |
Or see this region's nucleotide sequence