Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23910 and PS417_23915 overlap by 4 nucleotides PS417_23915 and PS417_23920 are separated by 224 nucleotides
PS417_23910: PS417_23910 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 5,174,543 to 5,175,343
_23910
PS417_23915: PS417_23915 - pantoate--beta-alanine ligase, at 5,175,340 to 5,176,191
_23915
PS417_23920: PS417_23920 - glucose-6-phosphate isomerase, at 5,176,416 to 5,178,080
_23920
Position (kb)
5175
5176
5177 Strain fitness (log2 ratio)
-2
-1
0
1 at 5174.398 kb on + strand at 5174.398 kb on + strand at 5174.399 kb on - strand at 5174.400 kb on + strand at 5174.450 kb on + strand at 5174.450 kb on + strand at 5174.450 kb on + strand at 5174.451 kb on - strand at 5174.451 kb on - strand at 5174.451 kb on - strand at 5174.452 kb on + strand at 5174.453 kb on - strand at 5174.453 kb on - strand at 5174.453 kb on - strand at 5174.453 kb on - strand at 5174.453 kb on - strand at 5174.481 kb on + strand at 5174.483 kb on + strand at 5174.997 kb on + strand, within PS417_23910 at 5174.997 kb on + strand, within PS417_23910 at 5174.997 kb on + strand, within PS417_23910 at 5174.997 kb on + strand, within PS417_23910 at 5174.998 kb on - strand, within PS417_23910 at 5174.998 kb on - strand, within PS417_23910 at 5174.998 kb on - strand, within PS417_23910 at 5174.998 kb on - strand, within PS417_23910 at 5175.115 kb on + strand, within PS417_23910 at 5175.183 kb on + strand, within PS417_23910 at 5175.284 kb on + strand at 5175.550 kb on + strand, within PS417_23915 at 5175.634 kb on + strand, within PS417_23915 at 5175.797 kb on - strand, within PS417_23915 at 5175.872 kb on + strand, within PS417_23915 at 5176.223 kb on + strand at 5176.276 kb on + strand at 5176.276 kb on + strand at 5176.288 kb on - strand at 5176.288 kb on - strand at 5176.298 kb on + strand at 5176.368 kb on + strand at 5176.379 kb on + strand at 5176.379 kb on + strand at 5176.397 kb on + strand at 5176.939 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 5,174,398 + +0.0 5,174,398 + +0.4 5,174,399 - +0.1 5,174,400 + -0.3 5,174,450 + +0.5 5,174,450 + +1.6 5,174,450 + +0.1 5,174,451 - -0.9 5,174,451 - -0.2 5,174,451 - -0.2 5,174,452 + -0.0 5,174,453 - -1.1 5,174,453 - -0.2 5,174,453 - -0.4 5,174,453 - +0.2 5,174,453 - +0.2 5,174,481 + +0.1 5,174,483 + -0.0 5,174,997 + PS417_23910 0.57 -0.4 5,174,997 + PS417_23910 0.57 -0.3 5,174,997 + PS417_23910 0.57 +0.5 5,174,997 + PS417_23910 0.57 -0.4 5,174,998 - PS417_23910 0.57 +1.0 5,174,998 - PS417_23910 0.57 -0.4 5,174,998 - PS417_23910 0.57 +0.5 5,174,998 - PS417_23910 0.57 -0.5 5,175,115 + PS417_23910 0.71 -0.3 5,175,183 + PS417_23910 0.80 -0.5 5,175,284 + +0.6 5,175,550 + PS417_23915 0.25 -0.7 5,175,634 + PS417_23915 0.35 -0.1 5,175,797 - PS417_23915 0.54 -1.0 5,175,872 + PS417_23915 0.62 -1.4 5,176,223 + -1.5 5,176,276 + -0.1 5,176,276 + -0.8 5,176,288 - -1.6 5,176,288 - -2.5 5,176,298 + -0.8 5,176,368 + +0.8 5,176,379 + -0.6 5,176,379 + -0.0 5,176,397 + +0.4 5,176,939 - -0.2
Or see this region's nucleotide sequence