Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23440 and PS417_23445 overlap by 1 nucleotides PS417_23445 and PS417_23450 are separated by 149 nucleotides PS417_23450 and PS417_23455 overlap by 11 nucleotides
PS417_23440: PS417_23440 - alpha/beta hydrolase, at 5,077,754 to 5,078,659
_23440
PS417_23445: PS417_23445 - aldolase, at 5,078,659 to 5,079,441
_23445
PS417_23450: PS417_23450 - membrane protein, at 5,079,591 to 5,080,277
_23450
PS417_23455: PS417_23455 - LrgA, at 5,080,267 to 5,080,638
_23455
Position (kb) 5078
5079
5080 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5077.812 kb on + strand at 5077.812 kb on + strand at 5077.813 kb on - strand at 5077.918 kb on + strand, within PS417_23440 at 5077.918 kb on + strand, within PS417_23440 at 5077.919 kb on - strand, within PS417_23440 at 5077.919 kb on - strand, within PS417_23440 at 5077.919 kb on - strand, within PS417_23440 at 5078.026 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.028 kb on + strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.029 kb on - strand, within PS417_23440 at 5078.508 kb on + strand, within PS417_23440 at 5078.508 kb on + strand, within PS417_23440 at 5078.667 kb on + strand at 5078.670 kb on - strand at 5079.115 kb on + strand, within PS417_23445 at 5079.115 kb on + strand, within PS417_23445 at 5079.115 kb on + strand at 5079.153 kb on + strand at 5079.153 kb on + strand, within PS417_23445 at 5079.153 kb on + strand, within PS417_23445 at 5079.154 kb on - strand, within PS417_23445 at 5079.155 kb on + strand, within PS417_23445 at 5079.176 kb on + strand, within PS417_23445 at 5079.176 kb on + strand, within PS417_23445 at 5079.177 kb on - strand, within PS417_23445 at 5079.303 kb on + strand, within PS417_23445 at 5079.497 kb on - strand at 5079.497 kb on - strand at 5079.497 kb on - strand at 5079.567 kb on + strand at 5080.109 kb on - strand, within PS417_23450 at 5080.152 kb on + strand, within PS417_23450 at 5080.153 kb on - strand, within PS417_23450 at 5080.182 kb on + strand, within PS417_23450 at 5080.182 kb on + strand, within PS417_23450 at 5080.182 kb on + strand, within PS417_23450 at 5080.183 kb on - strand, within PS417_23450 at 5080.183 kb on - strand, within PS417_23450 at 5080.183 kb on - strand, within PS417_23450 at 5080.223 kb on + strand at 5080.223 kb on + strand at 5080.223 kb on + strand at 5080.225 kb on + strand at 5080.225 kb on + strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.226 kb on - strand at 5080.282 kb on + strand at 5080.283 kb on - strand at 5080.397 kb on + strand, within PS417_23455 at 5080.397 kb on + strand, within PS417_23455 at 5080.398 kb on - strand, within PS417_23455
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 5,077,812 + -0.7 5,077,812 + -0.1 5,077,813 - -0.0 5,077,918 + PS417_23440 0.18 -0.0 5,077,918 + PS417_23440 0.18 -0.7 5,077,919 - PS417_23440 0.18 -0.1 5,077,919 - PS417_23440 0.18 +1.1 5,077,919 - PS417_23440 0.18 +0.5 5,078,026 + PS417_23440 0.30 -0.3 5,078,028 + PS417_23440 0.30 +0.2 5,078,028 + PS417_23440 0.30 +1.4 5,078,028 + PS417_23440 0.30 +0.3 5,078,028 + PS417_23440 0.30 +2.4 5,078,028 + PS417_23440 0.30 -0.9 5,078,028 + PS417_23440 0.30 +0.0 5,078,028 + PS417_23440 0.30 +0.4 5,078,028 + PS417_23440 0.30 +0.1 5,078,028 + PS417_23440 0.30 +0.1 5,078,029 - PS417_23440 0.30 -2.2 5,078,029 - PS417_23440 0.30 +0.7 5,078,029 - PS417_23440 0.30 -0.2 5,078,029 - PS417_23440 0.30 -0.1 5,078,029 - PS417_23440 0.30 -0.1 5,078,029 - PS417_23440 0.30 -0.2 5,078,029 - PS417_23440 0.30 -0.3 5,078,508 + PS417_23440 0.83 -0.7 5,078,508 + PS417_23440 0.83 +0.2 5,078,667 + -0.0 5,078,670 - +0.1 5,079,115 + PS417_23445 0.58 +0.7 5,079,115 + PS417_23445 0.58 +1.0 5,079,115 + +1.2 5,079,153 + -0.2 5,079,153 + PS417_23445 0.63 +0.2 5,079,153 + PS417_23445 0.63 +1.0 5,079,154 - PS417_23445 0.63 +0.1 5,079,155 + PS417_23445 0.63 +1.7 5,079,176 + PS417_23445 0.66 +0.3 5,079,176 + PS417_23445 0.66 -0.3 5,079,177 - PS417_23445 0.66 +0.8 5,079,303 + PS417_23445 0.82 +0.8 5,079,497 - -0.1 5,079,497 - +0.1 5,079,497 - +0.1 5,079,567 + -0.6 5,080,109 - PS417_23450 0.75 -0.9 5,080,152 + PS417_23450 0.82 +0.2 5,080,153 - PS417_23450 0.82 -1.5 5,080,182 + PS417_23450 0.86 -0.7 5,080,182 + PS417_23450 0.86 +0.3 5,080,182 + PS417_23450 0.86 -0.1 5,080,183 - PS417_23450 0.86 +0.1 5,080,183 - PS417_23450 0.86 -0.2 5,080,183 - PS417_23450 0.86 +0.5 5,080,223 + -1.2 5,080,223 + -0.4 5,080,223 + -0.8 5,080,225 + -1.6 5,080,225 + -0.4 5,080,226 - +0.7 5,080,226 - +0.6 5,080,226 - -0.5 5,080,226 - -0.3 5,080,226 - +0.7 5,080,226 - +0.8 5,080,282 + -0.5 5,080,283 - -0.1 5,080,397 + PS417_23455 0.35 +0.8 5,080,397 + PS417_23455 0.35 +0.2 5,080,398 - PS417_23455 0.35 -0.2
Or see this region's nucleotide sequence