Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_20765 and PS417_20770 overlap by 8 nucleotides PS417_20770 and PS417_20775 are separated by 103 nucleotides PS417_20775 and PS417_20780 are separated by 1 nucleotides PS417_20780 and PS417_20785 are separated by 152 nucleotides
PS417_20765: PS417_20765 - cytochrome oxidase maturation protein Cbb3, at 4,512,592 to 4,512,804
_20765
PS417_20770: PS417_20770 - cytochrome biogenesis protein, at 4,512,797 to 4,513,480
_20770
PS417_20775: PS417_20775 - coproporphyrinogen III oxidase, at 4,513,584 to 4,514,966
_20775
PS417_20780: PS417_20780 - hypothetical protein, at 4,514,968 to 4,515,435
_20780
PS417_20785: PS417_20785 - transcriptional regulator, at 4,515,588 to 4,516,322
_20785
Position (kb)
4513
4514
4515 Strain fitness (log2 ratio)
-1
0
1 at 4513.496 kb on - strand at 4513.752 kb on + strand, within PS417_20775 at 4513.753 kb on - strand, within PS417_20775 at 4513.753 kb on - strand at 4513.786 kb on - strand, within PS417_20775 at 4514.445 kb on + strand, within PS417_20775 at 4514.532 kb on + strand, within PS417_20775 at 4514.532 kb on + strand, within PS417_20775 at 4514.923 kb on - strand at 4515.073 kb on + strand, within PS417_20780 at 4515.073 kb on + strand, within PS417_20780 at 4515.073 kb on + strand, within PS417_20780 at 4515.073 kb on + strand, within PS417_20780 at 4515.074 kb on - strand, within PS417_20780 at 4515.126 kb on + strand, within PS417_20780 at 4515.127 kb on - strand, within PS417_20780 at 4515.416 kb on + strand at 4515.416 kb on + strand at 4515.417 kb on - strand at 4515.454 kb on + strand at 4515.454 kb on + strand at 4515.455 kb on - strand at 4515.455 kb on - strand at 4515.455 kb on - strand at 4515.458 kb on + strand at 4515.459 kb on - strand at 4515.459 kb on - strand at 4515.459 kb on - strand at 4515.459 kb on - strand at 4515.459 kb on - strand at 4515.459 kb on - strand at 4515.558 kb on + strand at 4515.558 kb on + strand at 4515.558 kb on + strand at 4515.558 kb on + strand at 4515.784 kb on + strand, within PS417_20785 at 4515.784 kb on + strand, within PS417_20785 at 4515.784 kb on + strand, within PS417_20785
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 4,513,496 - +0.3 4,513,752 + PS417_20775 0.12 -1.1 4,513,753 - PS417_20775 0.12 -0.3 4,513,753 - -1.4 4,513,786 - PS417_20775 0.15 -1.0 4,514,445 + PS417_20775 0.62 -0.8 4,514,532 + PS417_20775 0.69 -1.6 4,514,532 + PS417_20775 0.69 +0.2 4,514,923 - +0.2 4,515,073 + PS417_20780 0.22 -0.5 4,515,073 + PS417_20780 0.22 +0.3 4,515,073 + PS417_20780 0.22 -0.2 4,515,073 + PS417_20780 0.22 -1.6 4,515,074 - PS417_20780 0.23 -0.2 4,515,126 + PS417_20780 0.34 +0.1 4,515,127 - PS417_20780 0.34 +0.7 4,515,416 + -0.5 4,515,416 + +0.1 4,515,417 - -0.5 4,515,454 + -0.4 4,515,454 + -0.2 4,515,455 - -0.2 4,515,455 - +1.6 4,515,455 - -0.0 4,515,458 + +0.9 4,515,459 - -0.8 4,515,459 - +0.4 4,515,459 - +0.1 4,515,459 - -0.3 4,515,459 - +0.5 4,515,459 - -1.0 4,515,558 + -0.4 4,515,558 + +0.6 4,515,558 + -0.7 4,515,558 + -0.6 4,515,784 + PS417_20785 0.27 +0.1 4,515,784 + PS417_20785 0.27 +0.2 4,515,784 + PS417_20785 0.27 +0.2
Or see this region's nucleotide sequence