Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14105 and PS417_14110 are separated by 189 nucleotides PS417_14110 and PS417_14115 are separated by 119 nucleotides PS417_14115 and PS417_14120 are separated by 0 nucleotides
PS417_14105: PS417_14105 - 6-O-methylguanine DNA methyltransferase, at 3,094,310 to 3,095,362
_14105
PS417_14110: PS417_14110 - 2-nitropropane dioxygenase, at 3,095,552 to 3,096,613
_14110
PS417_14115: PS417_14115 - molybdate ABC transporter substrate-binding protein, at 3,096,733 to 3,097,491
_14115
PS417_14120: PS417_14120 - molybdenum ABC transporter permease, at 3,097,492 to 3,098,172
_14120
Position (kb)
3095
3096
3097 Strain fitness (log2 ratio)
-2
-1
0
1 at 3094.763 kb on + strand, within PS417_14105 at 3094.764 kb on - strand, within PS417_14105 at 3094.822 kb on + strand, within PS417_14105 at 3095.274 kb on + strand at 3095.403 kb on + strand at 3095.478 kb on + strand at 3095.478 kb on + strand at 3095.636 kb on - strand at 3095.636 kb on - strand at 3095.662 kb on + strand, within PS417_14110 at 3095.663 kb on - strand at 3095.841 kb on - strand, within PS417_14110 at 3095.994 kb on + strand at 3095.994 kb on + strand, within PS417_14110 at 3096.285 kb on - strand, within PS417_14110 at 3096.292 kb on + strand, within PS417_14110 at 3096.561 kb on - strand at 3096.561 kb on - strand at 3096.612 kb on - strand at 3096.643 kb on - strand at 3096.643 kb on - strand at 3096.643 kb on - strand at 3096.664 kb on + strand at 3096.664 kb on + strand at 3096.667 kb on - strand at 3096.674 kb on + strand at 3096.675 kb on - strand at 3096.919 kb on + strand, within PS417_14115 at 3096.953 kb on + strand, within PS417_14115 at 3096.975 kb on + strand, within PS417_14115 at 3097.026 kb on + strand at 3097.026 kb on + strand, within PS417_14115 at 3097.027 kb on - strand, within PS417_14115 at 3097.031 kb on - strand, within PS417_14115 at 3097.073 kb on - strand, within PS417_14115 at 3097.300 kb on + strand, within PS417_14115 at 3097.301 kb on - strand, within PS417_14115 at 3097.302 kb on + strand, within PS417_14115 at 3097.443 kb on + strand at 3097.468 kb on + strand at 3097.469 kb on - strand at 3097.469 kb on - strand at 3097.489 kb on + strand at 3097.489 kb on + strand at 3097.489 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 3,094,763 + PS417_14105 0.43 -0.3 3,094,764 - PS417_14105 0.43 +0.5 3,094,822 + PS417_14105 0.49 +0.1 3,095,274 + -0.2 3,095,403 + -0.6 3,095,478 + +0.2 3,095,478 + -0.4 3,095,636 - -0.1 3,095,636 - -0.2 3,095,662 + PS417_14110 0.10 -0.8 3,095,663 - -0.3 3,095,841 - PS417_14110 0.27 -0.1 3,095,994 + +1.4 3,095,994 + PS417_14110 0.42 +0.3 3,096,285 - PS417_14110 0.69 +1.1 3,096,292 + PS417_14110 0.70 -0.2 3,096,561 - -0.4 3,096,561 - -0.4 3,096,612 - -0.9 3,096,643 - -0.8 3,096,643 - +0.3 3,096,643 - -0.5 3,096,664 + +0.4 3,096,664 + -0.3 3,096,667 - +0.3 3,096,674 + +0.5 3,096,675 - -0.1 3,096,919 + PS417_14115 0.25 -1.5 3,096,953 + PS417_14115 0.29 -1.6 3,096,975 + PS417_14115 0.32 -1.0 3,097,026 + -0.5 3,097,026 + PS417_14115 0.39 -1.3 3,097,027 - PS417_14115 0.39 +0.4 3,097,031 - PS417_14115 0.39 -1.0 3,097,073 - PS417_14115 0.45 -1.5 3,097,300 + PS417_14115 0.75 -0.7 3,097,301 - PS417_14115 0.75 -1.8 3,097,302 + PS417_14115 0.75 -0.9 3,097,443 + -0.9 3,097,468 + -1.1 3,097,469 - -1.5 3,097,469 - -1.2 3,097,489 + +0.1 3,097,489 + -0.3 3,097,489 + -1.1
Or see this region's nucleotide sequence