Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13155 and PS417_13160 are separated by 63 nucleotides PS417_13160 and PS417_13165 are separated by 27 nucleotides PS417_13165 and PS417_13170 are separated by 14 nucleotides
PS417_13155: PS417_13155 - phosphatidylserine synthase, at 2,873,776 to 2,875,119
_13155
PS417_13160: PS417_13160 - iron transporter, at 2,875,183 to 2,876,001
_13160
PS417_13165: PS417_13165 - peroxidase, at 2,876,029 to 2,877,333
_13165
PS417_13170: PS417_13170 - multidrug DMT transporter permease, at 2,877,348 to 2,878,550
_13170
Position (kb)
2876
2877
2878 Strain fitness (log2 ratio)
-1
0
1
2 at 2875.117 kb on + strand at 2875.184 kb on + strand at 2875.185 kb on - strand at 2875.448 kb on + strand, within PS417_13160 at 2875.531 kb on + strand, within PS417_13160 at 2875.531 kb on + strand, within PS417_13160 at 2875.532 kb on - strand, within PS417_13160 at 2875.629 kb on + strand, within PS417_13160 at 2875.648 kb on + strand, within PS417_13160 at 2875.648 kb on + strand at 2875.653 kb on - strand, within PS417_13160 at 2875.653 kb on - strand, within PS417_13160 at 2875.775 kb on + strand at 2875.775 kb on + strand, within PS417_13160 at 2875.775 kb on + strand, within PS417_13160 at 2876.030 kb on + strand at 2876.031 kb on - strand at 2876.031 kb on - strand at 2876.147 kb on + strand at 2876.147 kb on + strand at 2876.384 kb on + strand, within PS417_13165 at 2876.523 kb on - strand, within PS417_13165 at 2877.095 kb on - strand, within PS417_13165 at 2877.457 kb on + strand at 2877.637 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.667 kb on - strand, within PS417_13170 at 2877.827 kb on - strand, within PS417_13170 at 2877.971 kb on - strand, within PS417_13170 at 2878.063 kb on + strand, within PS417_13170 at 2878.199 kb on - strand, within PS417_13170
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 2,875,117 + +0.9 2,875,184 + +0.1 2,875,185 - -0.3 2,875,448 + PS417_13160 0.32 +0.3 2,875,531 + PS417_13160 0.42 +0.3 2,875,531 + PS417_13160 0.42 -1.6 2,875,532 - PS417_13160 0.43 +0.3 2,875,629 + PS417_13160 0.54 +0.4 2,875,648 + PS417_13160 0.57 +0.5 2,875,648 + +2.4 2,875,653 - PS417_13160 0.57 -0.0 2,875,653 - PS417_13160 0.57 +0.8 2,875,775 + -0.3 2,875,775 + PS417_13160 0.72 -1.5 2,875,775 + PS417_13160 0.72 +0.6 2,876,030 + -0.1 2,876,031 - -1.1 2,876,031 - -0.2 2,876,147 + -0.8 2,876,147 + +0.5 2,876,384 + PS417_13165 0.27 -1.5 2,876,523 - PS417_13165 0.38 -0.7 2,877,095 - PS417_13165 0.82 -1.5 2,877,457 + +0.1 2,877,637 + PS417_13170 0.24 -0.1 2,877,666 + PS417_13170 0.26 -1.0 2,877,666 + PS417_13170 0.26 -1.2 2,877,666 + PS417_13170 0.26 -0.0 2,877,666 + PS417_13170 0.26 -1.4 2,877,667 - PS417_13170 0.27 +0.3 2,877,827 - PS417_13170 0.40 +0.8 2,877,971 - PS417_13170 0.52 -0.7 2,878,063 + PS417_13170 0.59 +0.0 2,878,199 - PS417_13170 0.71 +0.1
Or see this region's nucleotide sequence