Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13130 and PS417_13135 are separated by 184 nucleotides PS417_13135 and PS417_13140 are separated by 12 nucleotides PS417_13140 and PS417_13145 are separated by 32 nucleotides PS417_13145 and PS417_13150 are separated by 53 nucleotides
PS417_13130: PS417_13130 - DNA repair protein, at 2,870,019 to 2,870,852
_13130
PS417_13135: PS417_13135 - hypothetical protein, at 2,871,037 to 2,871,351
_13135
PS417_13140: PS417_13140 - oxidoreductase, at 2,871,364 to 2,872,521
_13140
PS417_13145: PS417_13145 - 50S ribosomal protein L21, at 2,872,554 to 2,873,033
_13145
PS417_13150: PS417_13150 - TetR family transcriptional regulator, at 2,873,087 to 2,873,650
_13150
Position (kb)
2871
2872
2873 Strain fitness (log2 ratio)
-1
0
1
2 at 2870.485 kb on + strand, within PS417_13130 at 2870.809 kb on - strand at 2870.852 kb on + strand at 2870.852 kb on + strand at 2870.853 kb on - strand at 2870.867 kb on - strand at 2870.942 kb on + strand at 2870.942 kb on + strand at 2870.963 kb on + strand at 2870.990 kb on - strand at 2871.011 kb on - strand at 2871.093 kb on + strand, within PS417_13135 at 2871.093 kb on + strand at 2871.264 kb on + strand, within PS417_13135 at 2871.264 kb on + strand, within PS417_13135 at 2871.268 kb on + strand, within PS417_13135 at 2871.269 kb on - strand, within PS417_13135 at 2871.325 kb on + strand at 2871.325 kb on + strand at 2871.326 kb on - strand at 2871.326 kb on - strand at 2871.326 kb on - strand at 2871.372 kb on - strand at 2871.701 kb on - strand, within PS417_13140 at 2871.701 kb on - strand at 2871.961 kb on + strand, within PS417_13140 at 2872.150 kb on + strand, within PS417_13140 at 2872.463 kb on - strand at 2872.463 kb on - strand at 2872.463 kb on - strand at 2872.466 kb on + strand at 2872.466 kb on + strand at 2872.563 kb on + strand at 2872.563 kb on + strand at 2872.564 kb on - strand at 2872.750 kb on + strand, within PS417_13145 at 2872.757 kb on - strand, within PS417_13145 at 2872.811 kb on - strand, within PS417_13145 at 2873.013 kb on + strand at 2873.054 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 2,870,485 + PS417_13130 0.56 +0.3 2,870,809 - +0.1 2,870,852 + +0.5 2,870,852 + +1.6 2,870,853 - -0.1 2,870,867 - +1.9 2,870,942 + +0.1 2,870,942 + +0.7 2,870,963 + -0.1 2,870,990 - +0.5 2,871,011 - -0.9 2,871,093 + PS417_13135 0.18 +0.7 2,871,093 + +0.7 2,871,264 + PS417_13135 0.72 -0.0 2,871,264 + PS417_13135 0.72 -0.5 2,871,268 + PS417_13135 0.73 +0.1 2,871,269 - PS417_13135 0.74 +0.3 2,871,325 + -0.1 2,871,325 + +0.1 2,871,326 - -0.4 2,871,326 - -0.1 2,871,326 - +0.3 2,871,372 - +0.5 2,871,701 - PS417_13140 0.29 -1.2 2,871,701 - +0.9 2,871,961 + PS417_13140 0.52 -1.2 2,872,150 + PS417_13140 0.68 +0.5 2,872,463 - -0.1 2,872,463 - -0.4 2,872,463 - -0.7 2,872,466 + -0.7 2,872,466 + +0.1 2,872,563 + +0.4 2,872,563 + +0.7 2,872,564 - -0.5 2,872,750 + PS417_13145 0.41 +0.1 2,872,757 - PS417_13145 0.42 -0.5 2,872,811 - PS417_13145 0.54 -1.7 2,873,013 + -0.5 2,873,054 - +0.4
Or see this region's nucleotide sequence