Strain Fitness in Pseudomonas simiae WCS417 around PS417_12450

Experiment: 2-Furfuraldehyde 0.03 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.03 vol%
2,706,794	+				-0.8
2,706,795	-				-2.3
2,706,798	+				-0.8
2,706,798	+				+0.0
2,706,855	-				+0.5
2,706,884	+				-0.6
2,706,885	-				+0.1
2,706,919	+				+1.8
2,707,000	+		PS417_12445	0.19	-2.6
2,707,104	+		PS417_12445	0.30	-0.1
2,707,105	-		PS417_12445	0.30	-1.4
2,707,106	+		PS417_12445	0.30	+0.5
2,707,155	+		PS417_12445	0.35	-0.9
2,707,253	+		PS417_12445	0.45	+0.6
2,707,253	+		PS417_12445	0.45	-1.1
2,707,254	-		PS417_12445	0.45	+1.1
2,707,341	+		PS417_12445	0.54	-0.1
2,707,341	+		PS417_12445	0.54	+0.0
2,707,342	-		PS417_12445	0.54	+0.8
2,707,728	+				-0.3
2,707,728	+				-0.5
2,707,729	-				+0.3
2,707,902	-				+0.6
2,707,902	-				+0.2
2,707,943	-				-0.2
2,708,129	+		PS417_12450	0.22	-0.1
2,708,130	-		PS417_12450	0.22	+0.1
2,708,130	-		PS417_12450	0.22	-0.7
2,708,130	-		PS417_12450	0.22	+0.4
2,708,130	-		PS417_12450	0.22	+0.1
2,708,130	-		PS417_12450	0.22	-0.0
2,708,130	-		PS417_12450	0.22	-0.2
2,708,462	+		PS417_12450	0.44	-1.6
2,708,462	+		PS417_12450	0.44	+0.2
2,708,463	-		PS417_12450	0.44	+0.1
2,708,463	-		PS417_12450	0.44	-0.0
2,708,963	+				-0.8
2,708,964	-		PS417_12450	0.77	+0.2
2,709,119	+		PS417_12450	0.87	-0.8
2,709,120	-		PS417_12450	0.87	+0.2
2,709,237	-				-0.2
2,709,529	-		PS417_12455	0.26	-0.4
2,709,755	-		PS417_12455	0.54	-0.3
2,709,877	+		PS417_12455	0.68	-0.7
2,710,080	+				-0.3
2,710,081	-				-0.3
2,710,119	+				+0.2
2,710,151	+				-0.0
2,710,206	-				-0.6
2,710,206	-				-0.0
2,710,209	+				-0.2
2,710,210	-				-0.1
2,710,300	-		PS417_12460	0.37	+1.8
2,710,301	+		PS417_12460	0.37	-0.1
2,710,301	+		PS417_12460	0.37	-0.1
2,710,302	-		PS417_12460	0.38	-0.4
2,710,302	-		PS417_12460	0.38	-0.5
2,710,302	-		PS417_12460	0.38	+0.4
2,710,302	-		PS417_12460	0.38	-0.5