Experiment: 2-Furfuraldehyde 0.03 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00525 and PS417_00530 overlap by 4 nucleotides PS417_00530 and PS417_00535 are separated by 26 nucleotides PS417_00535 and PS417_00540 are separated by 80 nucleotides PS417_00540 and PS417_00545 are separated by 136 nucleotides PS417_00545 and PS417_00550 are separated by 263 nucleotides
PS417_00525: PS417_00525 - hypothetical protein, at 105,924 to 107,885
_00525
PS417_00530: PS417_00530 - hypothetical protein, at 107,882 to 108,202
_00530
PS417_00535: PS417_00535 - Holliday junction resolvase, at 108,229 to 108,537
_00535
PS417_00540: PS417_00540 - hypothetical protein, at 108,618 to 108,938
_00540
PS417_00545: PS417_00545 - hypothetical protein, at 109,075 to 109,260
_00545
PS417_00550: PS417_00550 - hypothetical protein, at 109,524 to 109,739
_00550
Position (kb)
108
109 Strain fitness (log2 ratio)
-1
0
1
2 at 107.263 kb on + strand at 107.263 kb on + strand, within PS417_00525 at 107.263 kb on + strand, within PS417_00525 at 107.326 kb on + strand, within PS417_00525 at 107.326 kb on + strand, within PS417_00525 at 107.326 kb on + strand, within PS417_00525 at 107.327 kb on - strand, within PS417_00525 at 107.501 kb on - strand, within PS417_00525 at 107.552 kb on + strand, within PS417_00525 at 107.657 kb on - strand, within PS417_00525 at 107.896 kb on + strand at 108.196 kb on + strand at 108.197 kb on - strand at 108.197 kb on - strand at 108.197 kb on - strand at 108.300 kb on - strand, within PS417_00535 at 108.300 kb on - strand, within PS417_00535 at 108.429 kb on - strand, within PS417_00535 at 108.514 kb on + strand at 108.576 kb on - strand at 108.623 kb on + strand at 108.953 kb on - strand at 108.953 kb on - strand at 108.953 kb on - strand at 108.965 kb on - strand at 109.003 kb on + strand at 109.003 kb on + strand at 109.004 kb on - strand at 109.006 kb on + strand at 109.006 kb on + strand at 109.007 kb on - strand at 109.033 kb on + strand at 109.237 kb on - strand, within PS417_00545 at 109.239 kb on - strand, within PS417_00545 at 109.239 kb on - strand, within PS417_00545 at 109.324 kb on + strand at 109.324 kb on + strand at 109.324 kb on + strand at 109.325 kb on - strand at 109.349 kb on + strand at 109.372 kb on + strand at 109.373 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.03 vol% remove 107,263 + +2.6 107,263 + PS417_00525 0.68 +0.2 107,263 + PS417_00525 0.68 +0.6 107,326 + PS417_00525 0.71 +0.1 107,326 + PS417_00525 0.71 -0.6 107,326 + PS417_00525 0.71 +0.6 107,327 - PS417_00525 0.72 +0.2 107,501 - PS417_00525 0.80 -0.6 107,552 + PS417_00525 0.83 -0.4 107,657 - PS417_00525 0.88 +0.9 107,896 + -0.0 108,196 + -0.6 108,197 - +0.2 108,197 - -0.1 108,197 - -0.4 108,300 - PS417_00535 0.23 -0.5 108,300 - PS417_00535 0.23 -0.2 108,429 - PS417_00535 0.65 -1.3 108,514 + +0.2 108,576 - -0.4 108,623 + +1.3 108,953 - -0.4 108,953 - -0.1 108,953 - -0.1 108,965 - +0.4 109,003 + -0.4 109,003 + +0.5 109,004 - -0.1 109,006 + +0.0 109,006 + -0.0 109,007 - +0.2 109,033 + +0.1 109,237 - PS417_00545 0.87 -1.7 109,239 - PS417_00545 0.88 +0.1 109,239 - PS417_00545 0.88 +0.2 109,324 + +1.0 109,324 + +0.2 109,324 + -0.7 109,325 - +0.1 109,349 + -0.5 109,372 + -0.3 109,373 - +0.2
Or see this region's nucleotide sequence