Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3392

Experiment: L-tyrosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (N)
4,004,456	-		Echvi_3391	0.70	-0.7
4,004,509	-		Echvi_3391	0.72	-2.3
4,004,526	+		Echvi_3391	0.72	+0.9
4,004,527	-		Echvi_3391	0.72	+0.1
4,004,552	+		Echvi_3391	0.73	+1.4
4,004,556	+		Echvi_3391	0.73	-1.3
4,004,557	-		Echvi_3391	0.73	+0.3
4,004,557	-		Echvi_3391	0.73	+1.2
4,004,582	-		Echvi_3391	0.74	-1.4
4,004,626	+		Echvi_3391	0.75	+0.9
4,004,645	+		Echvi_3391	0.76	+0.3
4,004,645	+		Echvi_3391	0.76	+1.1
4,004,646	-		Echvi_3391	0.76	-0.6
4,004,650	+		Echvi_3391	0.76	-0.4
4,004,651	-		Echvi_3391	0.76	+0.7
4,004,683	-		Echvi_3391	0.77	-2.2
4,004,690	+		Echvi_3391	0.77	+1.3
4,004,690	+		Echvi_3391	0.77	-0.3
4,004,725	-		Echvi_3391	0.78	-0.8
4,004,725	-		Echvi_3391	0.78	+0.5
4,004,737	-		Echvi_3391	0.79	+0.9
4,004,769	+		Echvi_3391	0.80	+2.1
4,004,769	+		Echvi_3391	0.80	-0.3
4,004,769	+		Echvi_3391	0.80	+2.9
4,004,770	-		Echvi_3391	0.80	-1.5
4,004,770	-		Echvi_3391	0.80	-0.3
4,004,770	-		Echvi_3391	0.80	+0.4
4,004,770	-		Echvi_3391	0.80	+0.7
4,004,781	-		Echvi_3391	0.80	-0.5
4,004,799	+		Echvi_3391	0.81	+1.1
4,004,799	+		Echvi_3391	0.81	+0.5
4,004,799	+		Echvi_3391	0.81	+0.5
4,004,800	-		Echvi_3391	0.81	+2.9
4,004,800	-		Echvi_3391	0.81	-0.8
4,004,800	-		Echvi_3391	0.81	+0.8
4,004,823	+		Echvi_3391	0.81	+2.0
4,004,823	+		Echvi_3391	0.81	+1.9
4,004,869	-		Echvi_3391	0.83	+2.0
4,004,909	+		Echvi_3391	0.84	+1.5
4,004,910	-		Echvi_3391	0.84	+0.5
4,004,916	+		Echvi_3391	0.84	-0.3
4,004,917	-		Echvi_3391	0.84	+1.1
4,004,917	-		Echvi_3391	0.84	-0.5
4,005,057	+		Echvi_3391	0.89	+2.4
4,005,058	-		Echvi_3391	0.89	+0.8
4,005,058	-		Echvi_3391	0.89	-1.5
4,005,058	-		Echvi_3391	0.89	-0.4
4,005,140	+				+1.0
4,005,156	+				+0.3
4,005,219	-				+1.0
4,005,222	+				+3.2
4,005,222	+				+3.0
4,005,223	-				-0.7
4,005,355	-				-0.3
4,005,355	-				+1.4
4,005,355	-				+0.7
4,005,363	-				-1.6
4,005,363	-				-0.6
4,005,363	-				+1.0
4,005,413	-				-1.3
4,005,453	+				+0.4
4,005,454	-				-3.3
4,005,454	-				-0.7
4,005,454	-				-0.2
4,005,454	-				+0.5
4,005,454	-				+0.2
4,005,454	-				-0.6
4,005,455	+				+0.5
4,005,455	+				+0.7
4,005,455	+				+2.1
4,005,455	+				+1.4
4,005,455	+				+2.2
4,005,455	+				-1.3
4,005,455	+				-1.2
4,005,455	+				+1.2
4,005,455	+				+1.9
4,005,456	-				-1.0
4,005,456	-				+1.0
4,005,456	-				+1.6
4,005,456	-				+0.5
4,005,456	-				+0.5
4,005,456	-				-2.0
4,005,456	-				+1.2
4,005,456	-				+1.7
4,005,456	-				-1.4
4,005,456	-				-1.1
4,005,456	-				-1.6
4,005,456	-				-0.9
4,005,456	-				+1.3
4,005,456	-				-1.0
4,005,456	-				-1.9
4,005,456	-				+0.5
4,005,457	+				-0.3
4,005,457	+				+2.0
4,005,457	+				+1.2
4,005,457	+				+1.6
4,005,457	+				+0.2
4,005,457	+				+0.9
4,005,457	+				+0.8
4,005,458	-				-1.0
4,005,458	-				-1.2
4,005,458	-				+0.7
4,005,458	-				-0.1
4,005,458	-				-0.5
4,005,458	-				+1.9
4,005,458	-				+0.7
4,005,472	+				-0.3
4,005,558	-				+0.6
4,005,686	+		Echvi_3392	0.17	+1.0
4,005,786	+		Echvi_3392	0.23	+1.5
4,005,787	-		Echvi_3392	0.24	-0.4
4,005,799	+		Echvi_3392	0.24	+0.2
4,005,843	+		Echvi_3392	0.27	+2.0
4,005,844	-		Echvi_3392	0.27	+0.2
4,005,859	-		Echvi_3392	0.28	-1.6
4,005,865	+		Echvi_3392	0.29	+1.0
4,005,885	+		Echvi_3392	0.30	+3.0
4,005,931	-		Echvi_3392	0.33	-0.5
4,005,932	+		Echvi_3392	0.33	+2.7
4,005,932	+		Echvi_3392	0.33	+2.1
4,005,932	+		Echvi_3392	0.33	+2.2
4,005,932	+		Echvi_3392	0.33	+1.2
4,005,932	+		Echvi_3392	0.33	-0.7
4,005,933	-		Echvi_3392	0.33	+0.6
4,006,087	-		Echvi_3392	0.44	+0.0
4,006,108	-		Echvi_3392	0.45	+0.7
4,006,108	-		Echvi_3392	0.45	+0.5
4,006,111	+		Echvi_3392	0.46	+0.8
4,006,112	-		Echvi_3392	0.46	-2.3
4,006,112	-		Echvi_3392	0.46	+1.8
4,006,125	+		Echvi_3392	0.47	+0.3
4,006,126	-		Echvi_3392	0.47	-2.3
4,006,206	-		Echvi_3392	0.52	-2.0
4,006,238	+		Echvi_3392	0.54	+1.0
4,006,239	-		Echvi_3392	0.54	+0.8
4,006,314	-		Echvi_3392	0.59	+1.0
4,006,335	-		Echvi_3392	0.61	+3.0
4,006,343	+		Echvi_3392	0.61	+2.0
4,006,344	-		Echvi_3392	0.61	-0.8
4,006,399	-		Echvi_3392	0.65	+3.5
4,006,415	+		Echvi_3392	0.66	+1.3
4,006,467	+		Echvi_3392	0.70	+1.3
4,006,467	+		Echvi_3392	0.70	+1.8
4,006,488	-		Echvi_3392	0.71	+1.3
4,006,491	+		Echvi_3392	0.71	+1.6
4,006,509	+		Echvi_3392	0.73	+0.6
4,006,554	+		Echvi_3392	0.76	+1.5
4,006,568	-		Echvi_3392	0.77	+0.3
4,006,741	-		Echvi_3392	0.88	-0.9
4,006,766	-				-2.7
4,006,766	-				-0.8
4,006,800	-				-0.3
4,006,801	+				+1.8
4,006,814	-				-1.7
4,006,834	-				-1.5
4,006,834	-				-1.7
4,006,841	+				+1.5
4,006,891	-				-0.8
4,006,893	+				+3.3
4,006,903	+				+0.9
4,006,908	+				-0.5
4,006,926	+				+3.5
4,006,936	+				+0.6
4,006,937	-				+1.0
4,006,939	-				+0.1
4,006,939	-				+1.8
4,006,943	+				-0.3
4,006,944	-				+0.0
4,006,945	+				+0.9
4,006,946	-				+1.5
4,007,007	+				+1.4
4,007,082	+		Echvi_3393	0.10	+3.2
4,007,083	-		Echvi_3393	0.10	-0.2
4,007,101	+		Echvi_3393	0.11	+1.3
4,007,101	+		Echvi_3393	0.11	+2.7
4,007,101	+		Echvi_3393	0.11	+1.5
4,007,101	+		Echvi_3393	0.11	+2.6
4,007,102	-		Echvi_3393	0.11	-1.6
4,007,102	-		Echvi_3393	0.11	+1.4
4,007,102	-		Echvi_3393	0.11	-0.9
4,007,102	-		Echvi_3393	0.11	-1.0
4,007,106	+		Echvi_3393	0.12	+2.4
4,007,106	+		Echvi_3393	0.12	+1.7
4,007,107	-		Echvi_3393	0.12	+0.8
4,007,128	+				+1.6
4,007,129	-		Echvi_3393	0.13	-0.1
4,007,129	-		Echvi_3393	0.13	+1.4
4,007,167	+		Echvi_3393	0.16	+0.4
4,007,168	-		Echvi_3393	0.16	+0.5
4,007,168	-		Echvi_3393	0.16	-0.7
4,007,225	-		Echvi_3393	0.19	-0.6
4,007,316	+		Echvi_3393	0.25	+1.4
4,007,317	-		Echvi_3393	0.25	+0.3
4,007,317	-		Echvi_3393	0.25	+1.0
4,007,359	+		Echvi_3393	0.28	+0.8
4,007,359	+		Echvi_3393	0.28	+2.1
4,007,359	+		Echvi_3393	0.28	+1.7
4,007,363	+		Echvi_3393	0.28	+0.2
4,007,435	+		Echvi_3393	0.32	+0.7
4,007,435	+		Echvi_3393	0.32	+0.5
4,007,436	-		Echvi_3393	0.32	+0.4
4,007,543	+		Echvi_3393	0.39	+1.1
4,007,585	-		Echvi_3393	0.42	-2.0
4,007,661	+		Echvi_3393	0.46	+1.4
4,007,661	+		Echvi_3393	0.46	-3.0
4,007,694	+		Echvi_3393	0.48	+1.7
4,007,694	+		Echvi_3393	0.48	+0.7
4,007,694	+		Echvi_3393	0.48	+1.7
4,007,694	+		Echvi_3393	0.48	+0.8
4,007,695	-		Echvi_3393	0.49	-2.0
4,007,869	+		Echvi_3393	0.59	+1.5
4,007,870	-		Echvi_3393	0.59	-0.6
4,007,870	-		Echvi_3393	0.59	+0.9
4,007,870	-		Echvi_3393	0.59	+0.1