Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3250

Experiment: L-tyrosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (N)
3,854,759	+				+0.3
3,854,760	-				-0.5
3,854,780	+		Echvi_3249	0.12	+0.6
3,854,781	-		Echvi_3249	0.12	+0.4
3,854,829	+		Echvi_3249	0.17	-0.0
3,854,839	+		Echvi_3249	0.18	-0.1
3,854,839	+		Echvi_3249	0.18	+0.7
3,854,840	-		Echvi_3249	0.18	+0.5
3,854,840	-				+0.5
3,854,843	-		Echvi_3249	0.18	-2.5
3,854,862	+		Echvi_3249	0.20	+0.5
3,854,862	+		Echvi_3249	0.20	+0.0
3,854,862	+		Echvi_3249	0.20	+1.3
3,854,863	-		Echvi_3249	0.20	-1.7
3,854,863	-		Echvi_3249	0.20	+0.6
3,854,872	+		Echvi_3249	0.21	-0.7
3,854,873	-		Echvi_3249	0.21	-3.8
3,854,873	-		Echvi_3249	0.21	-0.9
3,854,873	-		Echvi_3249	0.21	+0.5
3,854,873	-		Echvi_3249	0.21	+1.2
3,854,881	+		Echvi_3249	0.22	-0.4
3,854,888	-		Echvi_3249	0.23	-0.2
3,854,903	+		Echvi_3249	0.24	-0.2
3,854,914	-		Echvi_3249	0.25	-2.6
3,854,914	-		Echvi_3249	0.25	-1.0
3,854,937	+		Echvi_3249	0.27	+2.3
3,854,940	+		Echvi_3249	0.28	+0.9
3,854,940	+		Echvi_3249	0.28	-0.1
3,854,940	+		Echvi_3249	0.28	-1.0
3,854,941	-		Echvi_3249	0.28	+0.5
3,854,941	-		Echvi_3249	0.28	-0.5
3,854,941	-		Echvi_3249	0.28	-1.6
3,854,941	-		Echvi_3249	0.28	+0.2
3,854,941	-		Echvi_3249	0.28	+0.0
3,854,941	-		Echvi_3249	0.28	+0.1
3,854,941	-		Echvi_3249	0.28	-2.3
3,854,942	+		Echvi_3249	0.28	-2.0
3,854,942	+		Echvi_3249	0.28	+1.9
3,854,942	+		Echvi_3249	0.28	-0.1
3,854,943	-		Echvi_3249	0.28	+3.4
3,854,943	-		Echvi_3249	0.28	+1.3
3,854,944	+		Echvi_3249	0.28	+0.3
3,854,944	+		Echvi_3249	0.28	-0.6
3,854,945	-		Echvi_3249	0.28	-0.6
3,854,945	-		Echvi_3249	0.28	+0.4
3,854,974	+		Echvi_3249	0.31	-0.6
3,855,012	+		Echvi_3249	0.35	+2.3
3,855,068	-		Echvi_3249	0.40	-1.6
3,855,118	-		Echvi_3249	0.45	-2.1
3,855,186	-		Echvi_3249	0.52	+0.2
3,855,218	+		Echvi_3249	0.55	-1.0
3,855,218	+		Echvi_3249	0.55	-1.7
3,855,218	+		Echvi_3249	0.55	+0.7
3,855,218	+		Echvi_3249	0.55	-2.6
3,855,287	-		Echvi_3249	0.62	+0.1
3,855,288	+		Echvi_3249	0.62	-1.7
3,855,288	+		Echvi_3249	0.62	+1.4
3,855,289	-		Echvi_3249	0.62	-1.1
3,855,336	-		Echvi_3249	0.67	+0.0
3,855,337	+		Echvi_3249	0.67	-2.4
3,855,337	+		Echvi_3249	0.67	-1.0
3,855,338	-		Echvi_3249	0.67	+0.5
3,855,385	+		Echvi_3249	0.71	-0.9
3,855,386	-		Echvi_3249	0.71	-0.2
3,855,390	+		Echvi_3249	0.72	+0.5
3,855,391	-		Echvi_3249	0.72	-1.9
3,855,407	+		Echvi_3249	0.74	-1.6
3,855,407	+		Echvi_3249	0.74	+0.2
3,855,407	+		Echvi_3249	0.74	+0.4
3,855,408	-		Echvi_3249	0.74	-1.7
3,855,451	-		Echvi_3249	0.78	+0.5
3,855,458	+		Echvi_3249	0.79	-0.7
3,855,519	+		Echvi_3249	0.85	-0.2
3,855,519	+		Echvi_3249	0.85	-0.3
3,855,520	-		Echvi_3249	0.85	-2.4
3,855,520	-		Echvi_3249	0.85	+0.4
3,855,521	+		Echvi_3249	0.85	-1.8
3,855,521	+		Echvi_3249	0.85	+0.0
3,855,522	-		Echvi_3249	0.85	-0.9
3,855,595	+				-0.4
3,855,595	+				-1.7
3,855,635	-				+0.4
3,855,713	+				+0.6
3,855,713	+				-0.5
3,855,713	+				-1.1
3,855,776	+				+0.8
3,855,783	+				-0.7
3,855,833	+				+0.7
3,855,834	-				+0.1
3,855,839	+				+1.6
3,855,840	-				+0.3
3,855,961	-		Echvi_3250	0.21	-0.9
3,856,025	-		Echvi_3250	0.27	+0.3
3,856,028	+		Echvi_3250	0.28	+1.8
3,856,028	+		Echvi_3250	0.28	-0.1
3,856,028	+		Echvi_3250	0.28	-0.7
3,856,028	+		Echvi_3250	0.28	-0.2
3,856,028	+		Echvi_3250	0.28	-0.3
3,856,028	+		Echvi_3250	0.28	-0.5
3,856,028	+		Echvi_3250	0.28	-0.8
3,856,029	-		Echvi_3250	0.28	-0.7
3,856,030	+		Echvi_3250	0.28	-1.2
3,856,043	+		Echvi_3250	0.29	-0.1
3,856,044	-		Echvi_3250	0.29	-0.3
3,856,073	+		Echvi_3250	0.32	-2.7
3,856,076	+		Echvi_3250	0.32	-1.0
3,856,185	+		Echvi_3250	0.43	-0.7
3,856,185	+		Echvi_3250	0.43	+1.1
3,856,186	-		Echvi_3250	0.43	+0.3
3,856,196	+		Echvi_3250	0.44	-0.2
3,856,227	+		Echvi_3250	0.47	+0.1
3,856,227	+		Echvi_3250	0.47	+1.1
3,856,227	+		Echvi_3250	0.47	+0.3
3,856,227	+		Echvi_3250	0.47	-1.1
3,856,228	-		Echvi_3250	0.47	-1.3
3,856,228	-		Echvi_3250	0.47	+1.8
3,856,244	-		Echvi_3250	0.48	+1.0
3,856,248	-		Echvi_3250	0.49	-0.6
3,856,362	+		Echvi_3250	0.60	+1.5
3,856,420	-		Echvi_3250	0.65	-0.5
3,856,442	+		Echvi_3250	0.67	-1.5
3,856,442	+		Echvi_3250	0.67	-0.7
3,856,442	+		Echvi_3250	0.67	+1.0
3,856,442	+		Echvi_3250	0.67	+0.4
3,856,443	-		Echvi_3250	0.67	+0.1
3,856,444	+		Echvi_3250	0.68	-0.3
3,856,505	+		Echvi_3250	0.73	+0.1
3,856,505	+		Echvi_3250	0.73	+0.3
3,856,528	-		Echvi_3250	0.76	-0.3
3,856,529	+		Echvi_3250	0.76	-2.6
3,856,529	+		Echvi_3250	0.76	+1.1
3,856,530	-		Echvi_3250	0.76	-0.1
3,856,530	-		Echvi_3250	0.76	-0.2
3,856,564	+		Echvi_3250	0.79	+1.6
3,856,575	+		Echvi_3250	0.80	-0.6
3,856,576	-		Echvi_3250	0.80	-2.8
3,856,576	-		Echvi_3250	0.80	-0.1
3,856,576	-		Echvi_3250	0.80	-0.8
3,856,576	-		Echvi_3250	0.80	+0.4
3,856,610	+		Echvi_3250	0.83	-0.7
3,856,610	+		Echvi_3250	0.83	-0.1
3,856,611	-		Echvi_3250	0.84	-1.3
3,856,614	+		Echvi_3250	0.84	-2.1
3,856,641	-		Echvi_3250	0.86	+0.4
3,856,641	-		Echvi_3250	0.86	-0.4
3,856,641	-		Echvi_3250	0.86	-0.5
3,856,641	-		Echvi_3250	0.86	-0.5
3,856,642	+		Echvi_3250	0.87	-1.3
3,856,682	+				-2.2
3,856,682	+				+0.8
3,856,682	+				+0.8
3,856,682	+				+2.4
3,856,682	+				-1.9
3,856,682	+				+1.1
3,856,682	+				+0.1
3,856,683	-				-1.6
3,856,683	-				-1.3
3,856,684	+				+0.4
3,856,684	+				-0.6
3,856,684	+				-1.2
3,856,684	+				+0.3
3,856,685	-				+0.8
3,856,685	-				-2.1
3,856,740	+				-3.0
3,856,755	-				-0.6
3,856,816	-				+0.8
3,856,816	-				-1.5
3,856,867	+				+1.1
3,856,868	-				+1.1
3,856,880	+		Echvi_3251	0.11	-0.9
3,856,883	-		Echvi_3251	0.11	-0.7
3,856,883	-		Echvi_3251	0.11	-1.8
3,856,883	-		Echvi_3251	0.11	-0.3
3,856,910	+		Echvi_3251	0.15	-1.7
3,856,914	+		Echvi_3251	0.15	+1.3
3,856,915	-		Echvi_3251	0.16	+0.3
3,856,927	+		Echvi_3251	0.17	+2.5
3,856,928	-		Echvi_3251	0.17	-1.0
3,856,928	-		Echvi_3251	0.17	-1.2
3,856,930	+		Echvi_3251	0.18	+1.3
3,857,028	-		Echvi_3251	0.31	+1.6
3,857,028	-		Echvi_3251	0.31	-2.5
3,857,035	+		Echvi_3251	0.32	-0.3
3,857,036	-		Echvi_3251	0.32	+0.8
3,857,040	+		Echvi_3251	0.33	-0.1
3,857,041	-		Echvi_3251	0.33	-0.4
3,857,056	-		Echvi_3251	0.35	+0.1
3,857,058	+		Echvi_3251	0.35	-0.3
3,857,058	+		Echvi_3251	0.35	+0.1
3,857,059	-		Echvi_3251	0.35	-0.1
3,857,060	+		Echvi_3251	0.35	+0.1
3,857,060	+		Echvi_3251	0.35	-0.6
3,857,060	+		Echvi_3251	0.35	+1.2
3,857,060	+		Echvi_3251	0.35	-0.0
3,857,060	+		Echvi_3251	0.35	+0.4
3,857,061	-		Echvi_3251	0.35	+1.5
3,857,061	-		Echvi_3251	0.35	-0.5
3,857,061	-		Echvi_3251	0.35	-0.9
3,857,061	-		Echvi_3251	0.35	-1.2
3,857,061	-		Echvi_3251	0.35	+0.1
3,857,118	+		Echvi_3251	0.43	-0.7
3,857,118	+		Echvi_3251	0.43	+0.0
3,857,118	+		Echvi_3251	0.43	-0.1
3,857,118	+		Echvi_3251	0.43	-0.2
3,857,157	+		Echvi_3251	0.48	-1.4
3,857,158	-		Echvi_3251	0.49	-0.6
3,857,158	-		Echvi_3251	0.49	-0.0
3,857,159	+		Echvi_3251	0.49	-0.0
3,857,160	-		Echvi_3251	0.49	-1.2
3,857,160	-		Echvi_3251	0.49	+0.2
3,857,191	-		Echvi_3251	0.53	-1.5
3,857,202	-		Echvi_3251	0.54	-0.7
3,857,232	+		Echvi_3251	0.59	+2.1
3,857,232	+		Echvi_3251	0.59	+0.5
3,857,233	-		Echvi_3251	0.59	+0.0
3,857,239	+		Echvi_3251	0.59	-1.1
3,857,240	-		Echvi_3251	0.60	-1.9
3,857,292	+		Echvi_3251	0.67	-0.3
3,857,292	+		Echvi_3251	0.67	-0.4
3,857,293	-		Echvi_3251	0.67	+0.2
3,857,293	-		Echvi_3251	0.67	-1.6
3,857,293	-		Echvi_3251	0.67	-0.4
3,857,293	-		Echvi_3251	0.67	-2.0
3,857,293	-		Echvi_3251	0.67	+0.4
3,857,298	+		Echvi_3251	0.67	-0.2
3,857,299	-		Echvi_3251	0.68	+0.3
3,857,327	-		Echvi_3251	0.71	+0.7
3,857,364	-		Echvi_3251	0.76	+0.1
3,857,457	-		Echvi_3251	0.89	-2.7
3,857,457	-		Echvi_3251	0.89	+0.4
3,857,461	-		Echvi_3251	0.90	-1.2
3,857,478	-				-0.9
3,857,484	+				+0.3
3,857,485	-				-0.8
3,857,485	-				+0.6
3,857,523	+				+0.0
3,857,549	+				+0.4
3,857,600	-				-1.3
3,857,604	+				+1.5
3,857,613	-				+0.1
3,857,620	-				-0.7
3,857,622	-				-0.6
3,857,665	-				-0.1
3,857,743	-		Echvi_3252	0.19	+0.8