Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2869 and Echvi_2870 are separated by 300 nucleotides Echvi_2870 and Echvi_2871 are separated by 101 nucleotides
Echvi_2869: Echvi_2869 - hypothetical protein, at 3,439,184 to 3,439,717
_2869
Echvi_2870: Echvi_2870 - hypothetical protein, at 3,440,018 to 3,441,679
_2870
Echvi_2871: Echvi_2871 - Predicted transcriptional regulator, at 3,441,781 to 3,442,722
_2871
Position (kb)
3440
3441
3442 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3439.074 kb on - strand at 3439.234 kb on + strand at 3439.234 kb on + strand at 3439.234 kb on + strand at 3439.235 kb on - strand at 3439.235 kb on - strand at 3439.284 kb on + strand, within Echvi_2869 at 3439.284 kb on + strand, within Echvi_2869 at 3439.285 kb on - strand, within Echvi_2869 at 3439.285 kb on - strand, within Echvi_2869 at 3439.285 kb on - strand, within Echvi_2869 at 3439.285 kb on - strand, within Echvi_2869 at 3439.285 kb on - strand, within Echvi_2869 at 3439.285 kb on - strand, within Echvi_2869 at 3439.316 kb on + strand, within Echvi_2869 at 3439.316 kb on + strand, within Echvi_2869 at 3439.316 kb on + strand, within Echvi_2869 at 3439.317 kb on - strand, within Echvi_2869 at 3439.317 kb on - strand, within Echvi_2869 at 3439.395 kb on + strand, within Echvi_2869 at 3439.396 kb on - strand, within Echvi_2869 at 3439.396 kb on - strand, within Echvi_2869 at 3439.396 kb on - strand, within Echvi_2869 at 3439.406 kb on - strand, within Echvi_2869 at 3439.445 kb on + strand, within Echvi_2869 at 3439.448 kb on + strand, within Echvi_2869 at 3439.484 kb on - strand, within Echvi_2869 at 3439.484 kb on - strand, within Echvi_2869 at 3439.560 kb on - strand, within Echvi_2869 at 3439.565 kb on - strand, within Echvi_2869 at 3439.585 kb on + strand, within Echvi_2869 at 3439.588 kb on + strand, within Echvi_2869 at 3439.634 kb on + strand, within Echvi_2869 at 3439.634 kb on + strand, within Echvi_2869 at 3439.639 kb on + strand, within Echvi_2869 at 3439.640 kb on - strand, within Echvi_2869 at 3439.641 kb on + strand, within Echvi_2869 at 3439.641 kb on + strand, within Echvi_2869 at 3439.641 kb on + strand, within Echvi_2869 at 3439.642 kb on - strand, within Echvi_2869 at 3439.682 kb on - strand at 3439.700 kb on - strand at 3439.770 kb on + strand at 3439.861 kb on + strand at 3439.861 kb on + strand at 3439.861 kb on + strand at 3439.862 kb on - strand at 3439.862 kb on - strand at 3439.862 kb on - strand at 3439.891 kb on + strand at 3439.954 kb on - strand at 3439.964 kb on - strand at 3439.987 kb on - strand at 3440.080 kb on + strand at 3440.178 kb on - strand at 3440.178 kb on - strand at 3440.229 kb on + strand, within Echvi_2870 at 3440.229 kb on + strand, within Echvi_2870 at 3440.230 kb on - strand, within Echvi_2870 at 3440.230 kb on - strand, within Echvi_2870 at 3440.230 kb on - strand, within Echvi_2870 at 3440.230 kb on - strand, within Echvi_2870 at 3440.319 kb on + strand, within Echvi_2870 at 3440.320 kb on - strand, within Echvi_2870 at 3440.320 kb on - strand, within Echvi_2870 at 3440.328 kb on - strand, within Echvi_2870 at 3440.341 kb on + strand, within Echvi_2870 at 3440.341 kb on + strand, within Echvi_2870 at 3440.342 kb on - strand, within Echvi_2870 at 3440.342 kb on - strand, within Echvi_2870 at 3440.342 kb on - strand, within Echvi_2870 at 3440.368 kb on + strand, within Echvi_2870 at 3440.369 kb on - strand, within Echvi_2870 at 3440.397 kb on - strand, within Echvi_2870 at 3440.397 kb on - strand, within Echvi_2870 at 3440.481 kb on - strand, within Echvi_2870 at 3440.519 kb on + strand, within Echvi_2870 at 3440.520 kb on - strand, within Echvi_2870 at 3440.551 kb on - strand, within Echvi_2870 at 3440.589 kb on - strand, within Echvi_2870 at 3440.617 kb on + strand, within Echvi_2870 at 3440.642 kb on - strand, within Echvi_2870 at 3440.742 kb on - strand, within Echvi_2870 at 3440.755 kb on + strand, within Echvi_2870 at 3440.756 kb on - strand, within Echvi_2870 at 3440.780 kb on + strand, within Echvi_2870 at 3440.780 kb on + strand, within Echvi_2870 at 3440.780 kb on + strand, within Echvi_2870 at 3440.780 kb on + strand, within Echvi_2870 at 3440.781 kb on - strand, within Echvi_2870 at 3440.781 kb on - strand, within Echvi_2870 at 3440.781 kb on - strand, within Echvi_2870 at 3440.781 kb on - strand, within Echvi_2870 at 3440.781 kb on - strand, within Echvi_2870 at 3440.781 kb on - strand, within Echvi_2870 at 3440.785 kb on + strand, within Echvi_2870 at 3440.785 kb on + strand, within Echvi_2870 at 3440.786 kb on - strand, within Echvi_2870 at 3440.786 kb on - strand, within Echvi_2870 at 3440.802 kb on - strand, within Echvi_2870 at 3440.824 kb on + strand, within Echvi_2870 at 3440.825 kb on - strand, within Echvi_2870 at 3440.846 kb on + strand, within Echvi_2870 at 3440.846 kb on + strand, within Echvi_2870 at 3440.847 kb on - strand, within Echvi_2870 at 3440.909 kb on - strand, within Echvi_2870 at 3440.921 kb on + strand, within Echvi_2870 at 3440.964 kb on + strand, within Echvi_2870 at 3440.964 kb on + strand, within Echvi_2870 at 3440.964 kb on + strand, within Echvi_2870 at 3440.964 kb on + strand, within Echvi_2870 at 3440.964 kb on + strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3440.965 kb on - strand, within Echvi_2870 at 3441.018 kb on + strand, within Echvi_2870 at 3441.033 kb on + strand, within Echvi_2870 at 3441.034 kb on - strand, within Echvi_2870 at 3441.034 kb on - strand, within Echvi_2870 at 3441.034 kb on - strand, within Echvi_2870 at 3441.056 kb on - strand, within Echvi_2870 at 3441.056 kb on - strand, within Echvi_2870 at 3441.056 kb on - strand, within Echvi_2870 at 3441.070 kb on - strand, within Echvi_2870 at 3441.070 kb on - strand, within Echvi_2870 at 3441.073 kb on + strand, within Echvi_2870 at 3441.076 kb on - strand, within Echvi_2870 at 3441.302 kb on + strand, within Echvi_2870 at 3441.302 kb on + strand, within Echvi_2870 at 3441.303 kb on - strand, within Echvi_2870 at 3441.303 kb on - strand, within Echvi_2870 at 3441.303 kb on - strand, within Echvi_2870 at 3441.306 kb on + strand, within Echvi_2870 at 3441.307 kb on - strand, within Echvi_2870 at 3441.352 kb on - strand, within Echvi_2870 at 3441.392 kb on - strand, within Echvi_2870 at 3441.393 kb on + strand, within Echvi_2870 at 3441.393 kb on + strand, within Echvi_2870 at 3441.394 kb on - strand, within Echvi_2870 at 3441.394 kb on - strand, within Echvi_2870 at 3441.468 kb on + strand, within Echvi_2870 at 3441.631 kb on - strand at 3441.631 kb on - strand at 3441.661 kb on + strand at 3441.662 kb on - strand at 3441.662 kb on - strand at 3441.667 kb on + strand at 3441.667 kb on + strand at 3441.671 kb on - strand at 3441.693 kb on + strand at 3441.696 kb on + strand at 3441.748 kb on + strand at 3441.748 kb on + strand at 3441.749 kb on - strand at 3441.861 kb on + strand at 3441.906 kb on + strand, within Echvi_2871 at 3441.976 kb on - strand, within Echvi_2871 at 3441.992 kb on + strand, within Echvi_2871 at 3441.997 kb on + strand, within Echvi_2871 at 3442.045 kb on + strand, within Echvi_2871 at 3442.045 kb on + strand, within Echvi_2871 at 3442.045 kb on + strand, within Echvi_2871 at 3442.046 kb on - strand, within Echvi_2871 at 3442.046 kb on - strand, within Echvi_2871 at 3442.046 kb on - strand, within Echvi_2871 at 3442.046 kb on - strand, within Echvi_2871 at 3442.046 kb on - strand, within Echvi_2871 at 3442.046 kb on - strand, within Echvi_2871 at 3442.100 kb on + strand, within Echvi_2871 at 3442.231 kb on + strand, within Echvi_2871 at 3442.231 kb on + strand, within Echvi_2871 at 3442.232 kb on - strand, within Echvi_2871 at 3442.232 kb on - strand, within Echvi_2871 at 3442.235 kb on - strand, within Echvi_2871 at 3442.243 kb on - strand, within Echvi_2871 at 3442.294 kb on - strand, within Echvi_2871 at 3442.370 kb on + strand, within Echvi_2871 at 3442.371 kb on - strand, within Echvi_2871 at 3442.384 kb on - strand, within Echvi_2871 at 3442.529 kb on - strand, within Echvi_2871 at 3442.529 kb on - strand, within Echvi_2871 at 3442.534 kb on + strand, within Echvi_2871 at 3442.535 kb on - strand, within Echvi_2871 at 3442.535 kb on - strand, within Echvi_2871 at 3442.551 kb on + strand, within Echvi_2871 at 3442.552 kb on - strand, within Echvi_2871 at 3442.556 kb on - strand, within Echvi_2871 at 3442.559 kb on - strand, within Echvi_2871 at 3442.559 kb on - strand, within Echvi_2871 at 3442.584 kb on - strand, within Echvi_2871 at 3442.658 kb on - strand at 3442.658 kb on - strand at 3442.658 kb on - strand at 3442.658 kb on - strand at 3442.658 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 3,439,074 - -0.2 3,439,234 + +0.1 3,439,234 + -2.1 3,439,234 + -1.3 3,439,235 - +0.2 3,439,235 - +0.5 3,439,284 + Echvi_2869 0.19 -0.1 3,439,284 + Echvi_2869 0.19 -1.6 3,439,285 - Echvi_2869 0.19 +0.8 3,439,285 - Echvi_2869 0.19 +2.8 3,439,285 - Echvi_2869 0.19 -0.9 3,439,285 - Echvi_2869 0.19 +2.3 3,439,285 - Echvi_2869 0.19 +0.5 3,439,285 - Echvi_2869 0.19 +0.9 3,439,316 + Echvi_2869 0.25 -1.1 3,439,316 + Echvi_2869 0.25 -0.2 3,439,316 + Echvi_2869 0.25 -0.3 3,439,317 - Echvi_2869 0.25 +1.0 3,439,317 - Echvi_2869 0.25 +1.4 3,439,395 + Echvi_2869 0.40 -0.9 3,439,396 - Echvi_2869 0.40 +0.7 3,439,396 - Echvi_2869 0.40 +0.4 3,439,396 - Echvi_2869 0.40 -0.1 3,439,406 - Echvi_2869 0.42 -1.2 3,439,445 + Echvi_2869 0.49 -0.4 3,439,448 + Echvi_2869 0.49 -1.5 3,439,484 - Echvi_2869 0.56 -1.2 3,439,484 - Echvi_2869 0.56 +0.0 3,439,560 - Echvi_2869 0.70 -2.4 3,439,565 - Echvi_2869 0.71 -0.4 3,439,585 + Echvi_2869 0.75 -0.5 3,439,588 + Echvi_2869 0.76 -2.1 3,439,634 + Echvi_2869 0.84 +2.5 3,439,634 + Echvi_2869 0.84 -1.1 3,439,639 + Echvi_2869 0.85 -1.0 3,439,640 - Echvi_2869 0.85 -0.3 3,439,641 + Echvi_2869 0.86 -1.6 3,439,641 + Echvi_2869 0.86 -1.2 3,439,641 + Echvi_2869 0.86 -0.0 3,439,642 - Echvi_2869 0.86 -0.3 3,439,682 - +0.5 3,439,700 - +1.6 3,439,770 + +0.3 3,439,861 + -0.7 3,439,861 + +0.5 3,439,861 + +0.6 3,439,862 - -1.0 3,439,862 - -0.9 3,439,862 - +0.8 3,439,891 + +0.5 3,439,954 - +1.5 3,439,964 - +1.4 3,439,987 - +1.0 3,440,080 + +1.1 3,440,178 - +1.0 3,440,178 - +1.9 3,440,229 + Echvi_2870 0.13 -1.4 3,440,229 + Echvi_2870 0.13 +1.5 3,440,230 - Echvi_2870 0.13 +0.7 3,440,230 - Echvi_2870 0.13 +2.1 3,440,230 - Echvi_2870 0.13 -0.8 3,440,230 - Echvi_2870 0.13 +1.6 3,440,319 + Echvi_2870 0.18 -0.1 3,440,320 - Echvi_2870 0.18 +1.9 3,440,320 - Echvi_2870 0.18 +1.0 3,440,328 - Echvi_2870 0.19 -0.3 3,440,341 + Echvi_2870 0.19 -1.1 3,440,341 + Echvi_2870 0.19 +0.8 3,440,342 - Echvi_2870 0.19 +0.8 3,440,342 - Echvi_2870 0.19 +1.1 3,440,342 - Echvi_2870 0.19 -0.3 3,440,368 + Echvi_2870 0.21 +0.9 3,440,369 - Echvi_2870 0.21 +1.7 3,440,397 - Echvi_2870 0.23 +0.8 3,440,397 - Echvi_2870 0.23 +0.7 3,440,481 - Echvi_2870 0.28 +0.1 3,440,519 + Echvi_2870 0.30 +1.2 3,440,520 - Echvi_2870 0.30 +2.5 3,440,551 - Echvi_2870 0.32 -0.4 3,440,589 - Echvi_2870 0.34 +1.2 3,440,617 + Echvi_2870 0.36 +0.7 3,440,642 - Echvi_2870 0.38 +0.9 3,440,742 - Echvi_2870 0.44 +2.1 3,440,755 + Echvi_2870 0.44 -0.5 3,440,756 - Echvi_2870 0.44 +1.7 3,440,780 + Echvi_2870 0.46 -0.0 3,440,780 + Echvi_2870 0.46 +1.2 3,440,780 + Echvi_2870 0.46 +0.7 3,440,780 + Echvi_2870 0.46 +2.1 3,440,781 - Echvi_2870 0.46 +1.7 3,440,781 - Echvi_2870 0.46 -0.9 3,440,781 - Echvi_2870 0.46 -0.2 3,440,781 - Echvi_2870 0.46 +0.6 3,440,781 - Echvi_2870 0.46 +0.7 3,440,781 - Echvi_2870 0.46 +0.5 3,440,785 + Echvi_2870 0.46 +2.4 3,440,785 + Echvi_2870 0.46 -1.1 3,440,786 - Echvi_2870 0.46 +3.4 3,440,786 - Echvi_2870 0.46 +1.0 3,440,802 - Echvi_2870 0.47 +1.9 3,440,824 + Echvi_2870 0.48 -0.5 3,440,825 - Echvi_2870 0.49 +1.5 3,440,846 + Echvi_2870 0.50 -0.5 3,440,846 + Echvi_2870 0.50 +0.7 3,440,847 - Echvi_2870 0.50 +1.0 3,440,909 - Echvi_2870 0.54 +1.6 3,440,921 + Echvi_2870 0.54 -0.6 3,440,964 + Echvi_2870 0.57 +0.8 3,440,964 + Echvi_2870 0.57 +2.9 3,440,964 + Echvi_2870 0.57 +0.8 3,440,964 + Echvi_2870 0.57 +1.5 3,440,964 + Echvi_2870 0.57 +0.5 3,440,965 - Echvi_2870 0.57 +1.5 3,440,965 - Echvi_2870 0.57 +1.2 3,440,965 - Echvi_2870 0.57 +1.5 3,440,965 - Echvi_2870 0.57 +2.4 3,440,965 - Echvi_2870 0.57 +1.4 3,440,965 - Echvi_2870 0.57 +0.8 3,440,965 - Echvi_2870 0.57 +1.1 3,440,965 - Echvi_2870 0.57 +1.6 3,440,965 - Echvi_2870 0.57 -1.1 3,440,965 - Echvi_2870 0.57 -2.0 3,440,965 - Echvi_2870 0.57 +0.9 3,441,018 + Echvi_2870 0.60 +0.7 3,441,033 + Echvi_2870 0.61 +1.4 3,441,034 - Echvi_2870 0.61 +0.1 3,441,034 - Echvi_2870 0.61 +0.3 3,441,034 - Echvi_2870 0.61 +0.8 3,441,056 - Echvi_2870 0.62 +1.0 3,441,056 - Echvi_2870 0.62 +0.7 3,441,056 - Echvi_2870 0.62 +2.2 3,441,070 - Echvi_2870 0.63 +0.7 3,441,070 - Echvi_2870 0.63 +0.1 3,441,073 + Echvi_2870 0.63 +0.1 3,441,076 - Echvi_2870 0.64 +1.7 3,441,302 + Echvi_2870 0.77 +0.7 3,441,302 + Echvi_2870 0.77 +1.3 3,441,303 - Echvi_2870 0.77 +2.2 3,441,303 - Echvi_2870 0.77 +2.0 3,441,303 - Echvi_2870 0.77 +2.3 3,441,306 + Echvi_2870 0.77 -1.4 3,441,307 - Echvi_2870 0.78 -1.1 3,441,352 - Echvi_2870 0.80 +1.0 3,441,392 - Echvi_2870 0.83 +0.4 3,441,393 + Echvi_2870 0.83 +1.8 3,441,393 + Echvi_2870 0.83 +2.1 3,441,394 - Echvi_2870 0.83 +1.1 3,441,394 - Echvi_2870 0.83 +1.3 3,441,468 + Echvi_2870 0.87 +1.8 3,441,631 - +0.9 3,441,631 - +0.6 3,441,661 + +1.6 3,441,662 - -0.1 3,441,662 - -1.3 3,441,667 + -0.0 3,441,667 + -3.1 3,441,671 - -2.1 3,441,693 + -0.5 3,441,696 + +0.1 3,441,748 + -0.5 3,441,748 + -0.4 3,441,749 - -2.4 3,441,861 + -0.6 3,441,906 + Echvi_2871 0.13 +0.6 3,441,976 - Echvi_2871 0.21 -0.3 3,441,992 + Echvi_2871 0.22 +0.6 3,441,997 + Echvi_2871 0.23 +0.1 3,442,045 + Echvi_2871 0.28 -3.3 3,442,045 + Echvi_2871 0.28 +1.2 3,442,045 + Echvi_2871 0.28 -0.1 3,442,046 - Echvi_2871 0.28 +0.4 3,442,046 - Echvi_2871 0.28 +0.1 3,442,046 - Echvi_2871 0.28 +0.6 3,442,046 - Echvi_2871 0.28 -1.3 3,442,046 - Echvi_2871 0.28 +0.5 3,442,046 - Echvi_2871 0.28 -1.2 3,442,100 + Echvi_2871 0.34 +0.4 3,442,231 + Echvi_2871 0.48 +0.1 3,442,231 + Echvi_2871 0.48 -0.1 3,442,232 - Echvi_2871 0.48 -2.3 3,442,232 - Echvi_2871 0.48 +0.1 3,442,235 - Echvi_2871 0.48 +1.2 3,442,243 - Echvi_2871 0.49 +0.9 3,442,294 - Echvi_2871 0.54 -2.2 3,442,370 + Echvi_2871 0.63 -0.3 3,442,371 - Echvi_2871 0.63 +1.9 3,442,384 - Echvi_2871 0.64 +1.4 3,442,529 - Echvi_2871 0.79 +0.4 3,442,529 - Echvi_2871 0.79 -0.7 3,442,534 + Echvi_2871 0.80 -1.0 3,442,535 - Echvi_2871 0.80 +0.4 3,442,535 - Echvi_2871 0.80 +0.8 3,442,551 + Echvi_2871 0.82 -1.2 3,442,552 - Echvi_2871 0.82 +1.1 3,442,556 - Echvi_2871 0.82 +1.1 3,442,559 - Echvi_2871 0.83 -0.5 3,442,559 - Echvi_2871 0.83 -1.8 3,442,584 - Echvi_2871 0.85 +1.3 3,442,658 - +0.1 3,442,658 - -0.4 3,442,658 - +1.0 3,442,658 - -0.4 3,442,658 - +0.3
Or see this region's nucleotide sequence