Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2841 and Echvi_2842 are separated by 65 nucleotides Echvi_2842 and Echvi_2843 are separated by 345 nucleotides
Echvi_2841: Echvi_2841 - Major Facilitator Superfamily., at 3,401,684 to 3,403,039
_2841
Echvi_2842: Echvi_2842 - Alpha-glucosidases, family 31 of glycosyl hydrolases, at 3,403,105 to 3,405,531
_2842
Echvi_2843: Echvi_2843 - hypothetical protein, at 3,405,877 to 3,407,004
_2843
Position (kb)
3403
3404
3405
3406 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3402.113 kb on + strand, within Echvi_2841 at 3402.113 kb on + strand, within Echvi_2841 at 3402.113 kb on + strand, within Echvi_2841 at 3402.114 kb on - strand, within Echvi_2841 at 3402.114 kb on - strand, within Echvi_2841 at 3402.116 kb on + strand, within Echvi_2841 at 3402.116 kb on + strand, within Echvi_2841 at 3402.117 kb on - strand, within Echvi_2841 at 3402.121 kb on + strand, within Echvi_2841 at 3402.123 kb on + strand, within Echvi_2841 at 3402.123 kb on + strand, within Echvi_2841 at 3402.124 kb on - strand, within Echvi_2841 at 3402.124 kb on - strand, within Echvi_2841 at 3402.124 kb on - strand, within Echvi_2841 at 3402.144 kb on - strand, within Echvi_2841 at 3402.163 kb on + strand, within Echvi_2841 at 3402.361 kb on + strand, within Echvi_2841 at 3402.393 kb on + strand, within Echvi_2841 at 3402.394 kb on - strand, within Echvi_2841 at 3402.455 kb on - strand, within Echvi_2841 at 3402.658 kb on + strand, within Echvi_2841 at 3402.658 kb on + strand, within Echvi_2841 at 3402.659 kb on - strand, within Echvi_2841 at 3402.744 kb on - strand, within Echvi_2841 at 3402.747 kb on - strand, within Echvi_2841 at 3402.828 kb on + strand, within Echvi_2841 at 3402.866 kb on - strand, within Echvi_2841 at 3402.972 kb on - strand at 3402.972 kb on - strand at 3402.972 kb on - strand at 3402.972 kb on - strand at 3403.048 kb on + strand at 3403.049 kb on - strand at 3403.096 kb on + strand at 3403.106 kb on + strand at 3403.106 kb on + strand at 3403.106 kb on + strand at 3403.107 kb on - strand at 3403.153 kb on - strand at 3403.274 kb on - strand at 3403.274 kb on - strand at 3403.307 kb on + strand at 3403.307 kb on + strand at 3403.315 kb on + strand at 3403.315 kb on + strand at 3403.316 kb on - strand at 3403.324 kb on - strand at 3403.324 kb on - strand at 3403.348 kb on + strand, within Echvi_2842 at 3403.349 kb on - strand, within Echvi_2842 at 3403.349 kb on - strand, within Echvi_2842 at 3403.389 kb on + strand, within Echvi_2842 at 3403.401 kb on + strand, within Echvi_2842 at 3403.401 kb on + strand, within Echvi_2842 at 3403.401 kb on + strand, within Echvi_2842 at 3403.426 kb on + strand, within Echvi_2842 at 3403.431 kb on + strand, within Echvi_2842 at 3403.431 kb on + strand, within Echvi_2842 at 3403.458 kb on - strand, within Echvi_2842 at 3403.458 kb on - strand, within Echvi_2842 at 3403.458 kb on - strand, within Echvi_2842 at 3403.541 kb on - strand, within Echvi_2842 at 3403.552 kb on - strand, within Echvi_2842 at 3403.602 kb on - strand, within Echvi_2842 at 3403.602 kb on - strand, within Echvi_2842 at 3403.622 kb on + strand, within Echvi_2842 at 3403.622 kb on + strand, within Echvi_2842 at 3403.623 kb on - strand, within Echvi_2842 at 3403.638 kb on - strand, within Echvi_2842 at 3403.638 kb on - strand, within Echvi_2842 at 3403.638 kb on - strand, within Echvi_2842 at 3403.638 kb on - strand, within Echvi_2842 at 3403.639 kb on + strand, within Echvi_2842 at 3403.640 kb on - strand, within Echvi_2842 at 3403.640 kb on - strand, within Echvi_2842 at 3403.640 kb on - strand, within Echvi_2842 at 3403.640 kb on - strand, within Echvi_2842 at 3403.640 kb on - strand, within Echvi_2842 at 3403.643 kb on + strand, within Echvi_2842 at 3403.644 kb on - strand, within Echvi_2842 at 3403.646 kb on + strand, within Echvi_2842 at 3403.647 kb on - strand, within Echvi_2842 at 3403.667 kb on + strand, within Echvi_2842 at 3403.728 kb on + strand, within Echvi_2842 at 3403.729 kb on - strand, within Echvi_2842 at 3403.729 kb on - strand, within Echvi_2842 at 3403.857 kb on + strand, within Echvi_2842 at 3403.858 kb on - strand, within Echvi_2842 at 3403.858 kb on - strand, within Echvi_2842 at 3404.005 kb on - strand, within Echvi_2842 at 3404.036 kb on + strand, within Echvi_2842 at 3404.098 kb on - strand, within Echvi_2842 at 3404.098 kb on - strand, within Echvi_2842 at 3404.098 kb on - strand, within Echvi_2842 at 3404.098 kb on - strand, within Echvi_2842 at 3404.098 kb on - strand, within Echvi_2842 at 3404.179 kb on - strand, within Echvi_2842 at 3404.202 kb on + strand, within Echvi_2842 at 3404.311 kb on - strand, within Echvi_2842 at 3404.421 kb on + strand, within Echvi_2842 at 3404.465 kb on + strand, within Echvi_2842 at 3404.465 kb on + strand, within Echvi_2842 at 3404.466 kb on - strand, within Echvi_2842 at 3404.484 kb on - strand, within Echvi_2842 at 3404.570 kb on - strand, within Echvi_2842 at 3404.570 kb on - strand, within Echvi_2842 at 3404.640 kb on + strand, within Echvi_2842 at 3404.644 kb on + strand, within Echvi_2842 at 3404.644 kb on + strand, within Echvi_2842 at 3404.644 kb on + strand, within Echvi_2842 at 3404.679 kb on - strand, within Echvi_2842 at 3404.728 kb on - strand, within Echvi_2842 at 3404.731 kb on + strand, within Echvi_2842 at 3404.731 kb on + strand, within Echvi_2842 at 3404.750 kb on + strand, within Echvi_2842 at 3404.750 kb on + strand, within Echvi_2842 at 3404.751 kb on - strand, within Echvi_2842 at 3404.864 kb on + strand, within Echvi_2842 at 3404.928 kb on + strand, within Echvi_2842 at 3404.946 kb on + strand, within Echvi_2842 at 3404.947 kb on - strand, within Echvi_2842 at 3405.106 kb on + strand, within Echvi_2842 at 3405.106 kb on + strand, within Echvi_2842 at 3405.107 kb on - strand, within Echvi_2842 at 3405.141 kb on + strand, within Echvi_2842 at 3405.143 kb on + strand, within Echvi_2842 at 3405.222 kb on - strand, within Echvi_2842 at 3405.222 kb on - strand, within Echvi_2842 at 3405.224 kb on + strand, within Echvi_2842 at 3405.224 kb on + strand, within Echvi_2842 at 3405.225 kb on - strand, within Echvi_2842 at 3405.228 kb on + strand, within Echvi_2842 at 3405.228 kb on + strand, within Echvi_2842 at 3405.228 kb on + strand, within Echvi_2842 at 3405.228 kb on + strand, within Echvi_2842 at 3405.250 kb on + strand, within Echvi_2842 at 3405.310 kb on + strand at 3405.357 kb on + strand at 3405.383 kb on - strand at 3405.403 kb on - strand at 3405.403 kb on - strand at 3405.406 kb on + strand at 3405.407 kb on - strand at 3405.417 kb on + strand at 3405.423 kb on - strand at 3405.475 kb on + strand at 3405.476 kb on - strand at 3405.543 kb on + strand at 3405.544 kb on - strand at 3405.544 kb on - strand at 3405.544 kb on - strand at 3405.582 kb on - strand at 3405.655 kb on + strand at 3405.655 kb on + strand at 3405.656 kb on - strand at 3405.656 kb on - strand at 3405.659 kb on - strand at 3405.666 kb on + strand at 3405.689 kb on + strand at 3405.690 kb on - strand at 3405.849 kb on + strand at 3405.849 kb on + strand at 3405.849 kb on + strand at 3405.849 kb on + strand at 3405.850 kb on - strand at 3405.850 kb on - strand at 3405.850 kb on - strand at 3405.888 kb on - strand at 3405.888 kb on - strand at 3405.903 kb on - strand at 3405.937 kb on + strand at 3405.950 kb on - strand at 3406.020 kb on - strand, within Echvi_2843 at 3406.075 kb on - strand, within Echvi_2843 at 3406.095 kb on + strand, within Echvi_2843 at 3406.096 kb on - strand, within Echvi_2843 at 3406.126 kb on + strand, within Echvi_2843 at 3406.127 kb on - strand, within Echvi_2843 at 3406.127 kb on - strand, within Echvi_2843 at 3406.129 kb on + strand, within Echvi_2843 at 3406.130 kb on - strand, within Echvi_2843 at 3406.155 kb on - strand, within Echvi_2843 at 3406.155 kb on - strand, within Echvi_2843 at 3406.155 kb on - strand, within Echvi_2843 at 3406.156 kb on + strand, within Echvi_2843 at 3406.156 kb on + strand, within Echvi_2843 at 3406.159 kb on + strand, within Echvi_2843 at 3406.159 kb on + strand, within Echvi_2843 at 3406.167 kb on + strand, within Echvi_2843 at 3406.183 kb on + strand, within Echvi_2843 at 3406.221 kb on + strand, within Echvi_2843 at 3406.222 kb on - strand, within Echvi_2843 at 3406.253 kb on + strand, within Echvi_2843 at 3406.253 kb on + strand, within Echvi_2843 at 3406.262 kb on + strand, within Echvi_2843 at 3406.263 kb on - strand, within Echvi_2843 at 3406.263 kb on - strand, within Echvi_2843 at 3406.266 kb on + strand, within Echvi_2843 at 3406.267 kb on - strand, within Echvi_2843 at 3406.267 kb on - strand, within Echvi_2843 at 3406.292 kb on - strand, within Echvi_2843 at 3406.352 kb on + strand, within Echvi_2843 at 3406.352 kb on + strand, within Echvi_2843 at 3406.352 kb on + strand, within Echvi_2843 at 3406.352 kb on + strand, within Echvi_2843 at 3406.352 kb on + strand, within Echvi_2843 at 3406.353 kb on - strand, within Echvi_2843 at 3406.353 kb on - strand, within Echvi_2843 at 3406.354 kb on + strand, within Echvi_2843 at 3406.355 kb on - strand, within Echvi_2843 at 3406.374 kb on + strand, within Echvi_2843 at 3406.423 kb on + strand, within Echvi_2843 at 3406.456 kb on - strand, within Echvi_2843 at 3406.474 kb on + strand, within Echvi_2843 at 3406.474 kb on + strand, within Echvi_2843 at 3406.474 kb on + strand, within Echvi_2843 at 3406.474 kb on + strand, within Echvi_2843 at 3406.475 kb on - strand, within Echvi_2843 at 3406.483 kb on - strand, within Echvi_2843 at 3406.504 kb on - strand, within Echvi_2843 at 3406.516 kb on - strand, within Echvi_2843 at 3406.518 kb on + strand, within Echvi_2843 at 3406.526 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 3,402,113 + Echvi_2841 0.32 +0.1 3,402,113 + Echvi_2841 0.32 -0.8 3,402,113 + Echvi_2841 0.32 -1.9 3,402,114 - Echvi_2841 0.32 +1.1 3,402,114 - Echvi_2841 0.32 -1.1 3,402,116 + Echvi_2841 0.32 +0.9 3,402,116 + Echvi_2841 0.32 -0.6 3,402,117 - Echvi_2841 0.32 -0.7 3,402,121 + Echvi_2841 0.32 +1.6 3,402,123 + Echvi_2841 0.32 -0.7 3,402,123 + Echvi_2841 0.32 +1.8 3,402,124 - Echvi_2841 0.32 -0.1 3,402,124 - Echvi_2841 0.32 +0.7 3,402,124 - Echvi_2841 0.32 +0.9 3,402,144 - Echvi_2841 0.34 -0.3 3,402,163 + Echvi_2841 0.35 +0.9 3,402,361 + Echvi_2841 0.50 +0.0 3,402,393 + Echvi_2841 0.52 -0.7 3,402,394 - Echvi_2841 0.52 +0.5 3,402,455 - Echvi_2841 0.57 +0.3 3,402,658 + Echvi_2841 0.72 -1.2 3,402,658 + Echvi_2841 0.72 +0.4 3,402,659 - Echvi_2841 0.72 -0.5 3,402,744 - Echvi_2841 0.78 -1.1 3,402,747 - Echvi_2841 0.78 +2.8 3,402,828 + Echvi_2841 0.84 +0.8 3,402,866 - Echvi_2841 0.87 -2.1 3,402,972 - +0.1 3,402,972 - +1.4 3,402,972 - -0.3 3,402,972 - -0.5 3,403,048 + -0.7 3,403,049 - -1.0 3,403,096 + +1.1 3,403,106 + +0.2 3,403,106 + -0.1 3,403,106 + -1.0 3,403,107 - -0.4 3,403,153 - -0.2 3,403,274 - +0.1 3,403,274 - -0.3 3,403,307 + +0.8 3,403,307 + +0.5 3,403,315 + -1.3 3,403,315 + +1.4 3,403,316 - -0.2 3,403,324 - -1.9 3,403,324 - -1.5 3,403,348 + Echvi_2842 0.10 +0.2 3,403,349 - Echvi_2842 0.10 -0.3 3,403,349 - Echvi_2842 0.10 -0.6 3,403,389 + Echvi_2842 0.12 -1.1 3,403,401 + Echvi_2842 0.12 -1.0 3,403,401 + Echvi_2842 0.12 -2.1 3,403,401 + Echvi_2842 0.12 -1.9 3,403,426 + Echvi_2842 0.13 -2.5 3,403,431 + Echvi_2842 0.13 +1.9 3,403,431 + Echvi_2842 0.13 -0.6 3,403,458 - Echvi_2842 0.15 -1.7 3,403,458 - Echvi_2842 0.15 +0.9 3,403,458 - Echvi_2842 0.15 -1.9 3,403,541 - Echvi_2842 0.18 -0.3 3,403,552 - Echvi_2842 0.18 +0.5 3,403,602 - Echvi_2842 0.20 -0.4 3,403,602 - Echvi_2842 0.20 -0.7 3,403,622 + Echvi_2842 0.21 -0.9 3,403,622 + Echvi_2842 0.21 -3.9 3,403,623 - Echvi_2842 0.21 -2.2 3,403,638 - Echvi_2842 0.22 -0.5 3,403,638 - Echvi_2842 0.22 -1.2 3,403,638 - Echvi_2842 0.22 -2.9 3,403,638 - Echvi_2842 0.22 -0.2 3,403,639 + Echvi_2842 0.22 -1.2 3,403,640 - Echvi_2842 0.22 -0.2 3,403,640 - Echvi_2842 0.22 -0.5 3,403,640 - Echvi_2842 0.22 +1.4 3,403,640 - Echvi_2842 0.22 +0.3 3,403,640 - Echvi_2842 0.22 -0.2 3,403,643 + Echvi_2842 0.22 +1.1 3,403,644 - Echvi_2842 0.22 -0.9 3,403,646 + Echvi_2842 0.22 +0.5 3,403,647 - Echvi_2842 0.22 -1.3 3,403,667 + Echvi_2842 0.23 -1.0 3,403,728 + Echvi_2842 0.26 -2.3 3,403,729 - Echvi_2842 0.26 -0.9 3,403,729 - Echvi_2842 0.26 -3.2 3,403,857 + Echvi_2842 0.31 +0.1 3,403,858 - Echvi_2842 0.31 -0.8 3,403,858 - Echvi_2842 0.31 -0.2 3,404,005 - Echvi_2842 0.37 -0.1 3,404,036 + Echvi_2842 0.38 +0.5 3,404,098 - Echvi_2842 0.41 +0.1 3,404,098 - Echvi_2842 0.41 +0.5 3,404,098 - Echvi_2842 0.41 +3.5 3,404,098 - Echvi_2842 0.41 +1.6 3,404,098 - Echvi_2842 0.41 -1.7 3,404,179 - Echvi_2842 0.44 -0.2 3,404,202 + Echvi_2842 0.45 -0.7 3,404,311 - Echvi_2842 0.50 -2.3 3,404,421 + Echvi_2842 0.54 -1.0 3,404,465 + Echvi_2842 0.56 -1.7 3,404,465 + Echvi_2842 0.56 -1.1 3,404,466 - Echvi_2842 0.56 +0.4 3,404,484 - Echvi_2842 0.57 +1.4 3,404,570 - Echvi_2842 0.60 -1.5 3,404,570 - Echvi_2842 0.60 -0.7 3,404,640 + Echvi_2842 0.63 +0.2 3,404,644 + Echvi_2842 0.63 +0.8 3,404,644 + Echvi_2842 0.63 -1.2 3,404,644 + Echvi_2842 0.63 -0.1 3,404,679 - Echvi_2842 0.65 -0.3 3,404,728 - Echvi_2842 0.67 -0.2 3,404,731 + Echvi_2842 0.67 -0.2 3,404,731 + Echvi_2842 0.67 -1.2 3,404,750 + Echvi_2842 0.68 -0.6 3,404,750 + Echvi_2842 0.68 +1.4 3,404,751 - Echvi_2842 0.68 -0.2 3,404,864 + Echvi_2842 0.72 +1.0 3,404,928 + Echvi_2842 0.75 +1.5 3,404,946 + Echvi_2842 0.76 -3.1 3,404,947 - Echvi_2842 0.76 +0.8 3,405,106 + Echvi_2842 0.82 -0.7 3,405,106 + Echvi_2842 0.82 +1.3 3,405,107 - Echvi_2842 0.82 -0.5 3,405,141 + Echvi_2842 0.84 -0.9 3,405,143 + Echvi_2842 0.84 +0.1 3,405,222 - Echvi_2842 0.87 -2.2 3,405,222 - Echvi_2842 0.87 +0.0 3,405,224 + Echvi_2842 0.87 -1.4 3,405,224 + Echvi_2842 0.87 +0.1 3,405,225 - Echvi_2842 0.87 -2.1 3,405,228 + Echvi_2842 0.87 -0.3 3,405,228 + Echvi_2842 0.87 -0.3 3,405,228 + Echvi_2842 0.87 +1.1 3,405,228 + Echvi_2842 0.87 -1.3 3,405,250 + Echvi_2842 0.88 +2.6 3,405,310 + -0.0 3,405,357 + -0.4 3,405,383 - -1.1 3,405,403 - -1.1 3,405,403 - -0.5 3,405,406 + -1.3 3,405,407 - +0.6 3,405,417 + -0.9 3,405,423 - -0.9 3,405,475 + -0.5 3,405,476 - +0.9 3,405,543 + +0.1 3,405,544 - +1.4 3,405,544 - +2.3 3,405,544 - -0.1 3,405,582 - +0.5 3,405,655 + +0.0 3,405,655 + -1.1 3,405,656 - +0.7 3,405,656 - -1.1 3,405,659 - +1.9 3,405,666 + -1.1 3,405,689 + +1.0 3,405,690 - -0.2 3,405,849 + +0.6 3,405,849 + -0.1 3,405,849 + -0.2 3,405,849 + +0.9 3,405,850 - -0.7 3,405,850 - +0.8 3,405,850 - -0.2 3,405,888 - +1.3 3,405,888 - -0.9 3,405,903 - +1.9 3,405,937 + +1.0 3,405,950 - -0.1 3,406,020 - Echvi_2843 0.13 -1.4 3,406,075 - Echvi_2843 0.18 +1.4 3,406,095 + Echvi_2843 0.19 +0.9 3,406,096 - Echvi_2843 0.19 +0.8 3,406,126 + Echvi_2843 0.22 -1.6 3,406,127 - Echvi_2843 0.22 +0.1 3,406,127 - Echvi_2843 0.22 -1.5 3,406,129 + Echvi_2843 0.22 -2.6 3,406,130 - Echvi_2843 0.22 -0.4 3,406,155 - Echvi_2843 0.25 -0.2 3,406,155 - Echvi_2843 0.25 +0.4 3,406,155 - Echvi_2843 0.25 +0.5 3,406,156 + Echvi_2843 0.25 +0.7 3,406,156 + Echvi_2843 0.25 -0.2 3,406,159 + Echvi_2843 0.25 +1.1 3,406,159 + Echvi_2843 0.25 -0.1 3,406,167 + Echvi_2843 0.26 -1.5 3,406,183 + Echvi_2843 0.27 +1.7 3,406,221 + Echvi_2843 0.30 +1.4 3,406,222 - Echvi_2843 0.31 +1.7 3,406,253 + Echvi_2843 0.33 +0.3 3,406,253 + Echvi_2843 0.33 +0.5 3,406,262 + Echvi_2843 0.34 +0.4 3,406,263 - Echvi_2843 0.34 +1.7 3,406,263 - Echvi_2843 0.34 -0.1 3,406,266 + Echvi_2843 0.34 -1.5 3,406,267 - Echvi_2843 0.35 -0.2 3,406,267 - Echvi_2843 0.35 +0.6 3,406,292 - Echvi_2843 0.37 -0.2 3,406,352 + Echvi_2843 0.42 -1.9 3,406,352 + Echvi_2843 0.42 +0.8 3,406,352 + Echvi_2843 0.42 +1.0 3,406,352 + Echvi_2843 0.42 -1.1 3,406,352 + Echvi_2843 0.42 -1.3 3,406,353 - Echvi_2843 0.42 +0.8 3,406,353 - Echvi_2843 0.42 +1.4 3,406,354 + Echvi_2843 0.42 -1.0 3,406,355 - Echvi_2843 0.42 +0.7 3,406,374 + Echvi_2843 0.44 -0.7 3,406,423 + Echvi_2843 0.48 -0.4 3,406,456 - Echvi_2843 0.51 +0.6 3,406,474 + Echvi_2843 0.53 +1.4 3,406,474 + Echvi_2843 0.53 +0.5 3,406,474 + Echvi_2843 0.53 -0.9 3,406,474 + Echvi_2843 0.53 +0.8 3,406,475 - Echvi_2843 0.53 +0.4 3,406,483 - Echvi_2843 0.54 +0.8 3,406,504 - Echvi_2843 0.56 +0.9 3,406,516 - Echvi_2843 0.57 +0.0 3,406,518 + Echvi_2843 0.57 -0.7 3,406,526 - +2.5
Or see this region's nucleotide sequence