Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2707

Experiment: L-tyrosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (N)
3,219,674	+		Echvi_2705	0.72	+0.9
3,219,731	-		Echvi_2705	0.76	-0.9
3,219,836	+		Echvi_2705	0.84	+0.9
3,219,889	+		Echvi_2705	0.89	-0.5
3,219,890	-		Echvi_2705	0.89	+2.5
3,219,890	-		Echvi_2705	0.89	+0.4
3,219,932	+				+2.1
3,219,932	+				+0.6
3,219,933	-				+1.1
3,219,933	-				-1.1
3,219,945	-				+0.5
3,219,945	-				+0.1
3,219,945	-				+1.7
3,220,033	+				+0.6
3,220,033	+				-0.1
3,220,033	+				-0.1
3,220,033	+				+0.9
3,220,033	+				-0.0
3,220,042	-				-0.9
3,220,066	-				+0.1
3,220,066	-				-1.2
3,220,131	-		Echvi_2706	0.21	-1.4
3,220,144	-		Echvi_2706	0.24	+1.1
3,220,158	-		Echvi_2706	0.28	+1.5
3,220,203	+		Echvi_2706	0.38	+0.5
3,220,204	-		Echvi_2706	0.39	+1.6
3,220,223	-		Echvi_2706	0.43	+0.6
3,220,352	-		Echvi_2706	0.74	+0.3
3,220,352	-		Echvi_2706	0.74	+1.0
3,220,371	-		Echvi_2706	0.79	+1.3
3,220,374	+		Echvi_2706	0.79	+0.5
3,220,412	-		Echvi_2706	0.88	-0.9
3,220,427	+				-1.8
3,220,428	-				+0.4
3,220,428	-				+0.3
3,220,428	-				-4.0
3,220,457	+				-0.2
3,220,509	+				+0.2
3,220,510	-				-0.1
3,220,510	-				-2.2
3,220,511	+				+0.1
3,220,511	+				+1.6
3,220,512	-				+1.4
3,220,512	-				-1.2
3,220,512	-				+0.7
3,220,549	-				+0.4
3,220,558	+				+0.5
3,220,563	+				-1.3
3,220,604	+				+1.2
3,220,605	-				-0.4
3,220,605	-				-0.5
3,220,610	+				+0.1
3,220,611	-				-1.6
3,220,615	+				+1.2
3,220,615	+				-1.6
3,220,615	+				-0.7
3,220,615	+				+0.9
3,220,615	+				+0.8
3,220,616	-				-0.2
3,220,616	-				-0.3
3,220,616	-				+0.9
3,220,616	-				+0.1
3,220,616	-				+1.0
3,220,619	+				-3.0
3,220,619	+				+0.8
3,220,619	+				-1.2
3,220,619	+				-0.7
3,220,694	+				-2.0
3,220,695	-				+1.1
3,220,695	-				-0.8
3,220,756	-				-1.9
3,220,756	-				+2.1
3,220,827	+		Echvi_2707	0.14	-0.5
3,220,828	-		Echvi_2707	0.14	+0.3
3,220,828	-		Echvi_2707	0.14	-1.0
3,220,828	-		Echvi_2707	0.14	+0.8
3,220,828	-		Echvi_2707	0.14	+1.6
3,220,828	-		Echvi_2707	0.14	+1.1
3,220,848	-		Echvi_2707	0.15	-1.9
3,220,869	-		Echvi_2707	0.17	+0.1
3,220,869	-		Echvi_2707	0.17	+2.1
3,220,869	-		Echvi_2707	0.17	-2.6
3,220,881	+		Echvi_2707	0.18	-0.3
3,220,881	+		Echvi_2707	0.18	-1.1
3,220,881	+		Echvi_2707	0.18	+0.5
3,220,882	-		Echvi_2707	0.18	-0.7
3,220,971	+		Echvi_2707	0.24	-1.1
3,220,972	-		Echvi_2707	0.24	+1.2
3,221,065	-		Echvi_2707	0.30	-0.4
3,221,185	+		Echvi_2707	0.38	+0.9
3,221,186	-		Echvi_2707	0.38	+1.3
3,221,218	-		Echvi_2707	0.41	+2.1
3,221,256	+		Echvi_2707	0.43	-1.5
3,221,257	-		Echvi_2707	0.43	+0.1
3,221,342	+		Echvi_2707	0.49	+0.4
3,221,343	-		Echvi_2707	0.49	+1.7
3,221,343	-		Echvi_2707	0.49	-0.7
3,221,397	+		Echvi_2707	0.53	+1.0
3,221,410	+		Echvi_2707	0.54	-3.5
3,221,411	-		Echvi_2707	0.54	+1.5
3,221,490	-		Echvi_2707	0.59	+0.9
3,221,491	+		Echvi_2707	0.59	+1.0
3,221,491	+		Echvi_2707	0.59	+1.2
3,221,563	+		Echvi_2707	0.64	+2.1
3,221,563	+		Echvi_2707	0.64	+0.4
3,221,563	+		Echvi_2707	0.64	-0.3
3,221,657	+		Echvi_2707	0.70	+0.8
3,221,658	-		Echvi_2707	0.70	+1.4
3,221,784	+		Echvi_2707	0.79	+1.1
3,221,785	-		Echvi_2707	0.79	+1.3
3,221,785	-		Echvi_2707	0.79	-0.0
3,221,808	-		Echvi_2707	0.80	-2.1
3,221,817	+		Echvi_2707	0.81	-1.1
3,221,819	+		Echvi_2707	0.81	+1.8
3,221,820	-		Echvi_2707	0.81	-0.1
3,221,853	-		Echvi_2707	0.84	-0.3
3,221,853	-		Echvi_2707	0.84	-0.3
3,221,853	-		Echvi_2707	0.84	-0.9
3,221,854	+		Echvi_2707	0.84	-1.2
3,221,854	+		Echvi_2707	0.84	+0.4
3,221,901	+		Echvi_2707	0.87	+0.6
3,221,989	+				-0.2
3,221,990	-				-0.5
3,222,039	+				-1.7
3,222,039	+				-0.1
3,222,040	-				-1.7
3,222,064	-				-0.9
3,222,067	+				+0.1
3,222,068	-				+0.8
3,222,068	-				+0.9
3,222,068	-				+1.3
3,222,135	+				-1.2
3,222,136	-				-1.6
3,222,136	-				+2.7
3,222,136	-				-0.7
3,222,136	-				+1.1
3,222,136	-				+2.1
3,222,138	-				-0.5
3,222,138	-				-1.2
3,222,138	-				+1.1
3,222,138	-				-0.1
3,222,164	+				+1.2
3,222,164	+				-1.6
3,222,164	+				-0.9
3,222,164	+				+1.5
3,222,165	-				-2.2
3,222,165	-				+0.1
3,222,165	-				-2.2
3,222,165	-				-0.5
3,222,193	-				+0.4
3,222,198	-				+0.9
3,222,216	-				-0.6
3,222,216	-				+1.2
3,222,301	+				-2.2
3,222,303	+				-2.0
3,222,303	+				-0.2
3,222,393	+				-3.3
3,222,419	+				-0.2
3,222,420	-				+0.6
3,222,424	+				+0.5
3,222,425	-				-0.3
3,222,436	-				+0.6
3,222,436	-				-0.4
3,222,480	-				+1.2
3,222,480	-				+0.1
3,222,552	-				+1.3
3,222,582	-				-0.1
3,222,613	-		Echvi_2708	0.15	+1.6
3,222,641	-		Echvi_2708	0.20	+0.4
3,222,641	-		Echvi_2708	0.20	-0.7
3,222,654	+		Echvi_2708	0.22	-0.1
3,222,698	+		Echvi_2708	0.29	+1.7
3,222,698	+		Echvi_2708	0.29	+0.0
3,222,698	+		Echvi_2708	0.29	-0.9
3,222,698	+		Echvi_2708	0.29	+0.0
3,222,728	-		Echvi_2708	0.34	-0.4
3,222,730	+		Echvi_2708	0.35	-0.4
3,222,769	-		Echvi_2708	0.41	-0.4
3,222,777	+		Echvi_2708	0.43	-0.8
3,222,805	+		Echvi_2708	0.47	+0.2
3,222,806	-		Echvi_2708	0.47	-0.4
3,222,867	-		Echvi_2708	0.58	-0.4
3,222,871	+		Echvi_2708	0.58	-0.3
3,222,874	+		Echvi_2708	0.59	-0.6
3,222,902	-		Echvi_2708	0.64	-0.0
3,222,922	-		Echvi_2708	0.67	-1.1
3,222,978	-		Echvi_2708	0.76	+0.8
3,222,978	-		Echvi_2708	0.76	-1.8
3,222,991	-		Echvi_2708	0.79	+1.1
3,223,040	-		Echvi_2708	0.87	-0.2
3,223,040	-		Echvi_2708	0.87	+1.3
3,223,043	+		Echvi_2708	0.87	-1.8
3,223,078	-				-0.3
3,223,090	-				-0.1
3,223,090	-				+2.2