Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2350 and Echvi_2351 are separated by 44 nucleotides Echvi_2351 and Echvi_2352 are separated by 64 nucleotides
Echvi_2350: Echvi_2350 - dinuclear metal center protein, YbgI/SA1388 family, at 2,787,318 to 2,788,418
_2350
Echvi_2351: Echvi_2351 - tetraacyldisaccharide 4'-kinase, at 2,788,463 to 2,789,530
_2351
Echvi_2352: Echvi_2352 - hypothetical protein, at 2,789,595 to 2,791,433
_2352
Position (kb)
2788
2789
2790 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2787.579 kb on - strand, within Echvi_2350 at 2787.737 kb on - strand, within Echvi_2350 at 2787.737 kb on - strand, within Echvi_2350 at 2787.777 kb on + strand, within Echvi_2350 at 2787.797 kb on - strand, within Echvi_2350 at 2787.797 kb on - strand, within Echvi_2350 at 2787.816 kb on + strand, within Echvi_2350 at 2787.816 kb on + strand, within Echvi_2350 at 2787.817 kb on - strand, within Echvi_2350 at 2787.817 kb on - strand, within Echvi_2350 at 2787.860 kb on + strand, within Echvi_2350 at 2787.864 kb on - strand, within Echvi_2350 at 2787.927 kb on - strand, within Echvi_2350 at 2788.175 kb on - strand, within Echvi_2350 at 2788.175 kb on - strand, within Echvi_2350 at 2788.175 kb on - strand, within Echvi_2350 at 2788.388 kb on - strand at 2788.403 kb on + strand at 2788.412 kb on + strand at 2788.413 kb on - strand at 2788.418 kb on + strand at 2788.418 kb on + strand at 2788.418 kb on + strand at 2788.419 kb on - strand at 2788.419 kb on - strand at 2788.419 kb on - strand at 2788.419 kb on - strand at 2788.420 kb on + strand at 2788.420 kb on + strand at 2788.420 kb on + strand at 2788.421 kb on - strand at 2788.482 kb on + strand at 2789.475 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 2,787,579 - Echvi_2350 0.24 -0.3 2,787,737 - Echvi_2350 0.38 +0.6 2,787,737 - Echvi_2350 0.38 -2.6 2,787,777 + Echvi_2350 0.42 +0.0 2,787,797 - Echvi_2350 0.44 -1.9 2,787,797 - Echvi_2350 0.44 -0.2 2,787,816 + Echvi_2350 0.45 +0.1 2,787,816 + Echvi_2350 0.45 +1.9 2,787,817 - Echvi_2350 0.45 -1.0 2,787,817 - Echvi_2350 0.45 -2.0 2,787,860 + Echvi_2350 0.49 -1.6 2,787,864 - Echvi_2350 0.50 -0.8 2,787,927 - Echvi_2350 0.55 +0.0 2,788,175 - Echvi_2350 0.78 -2.0 2,788,175 - Echvi_2350 0.78 +0.1 2,788,175 - Echvi_2350 0.78 -0.4 2,788,388 - -1.4 2,788,403 + -1.0 2,788,412 + -0.5 2,788,413 - +2.6 2,788,418 + -1.8 2,788,418 + -0.2 2,788,418 + +1.4 2,788,419 - +2.2 2,788,419 - +0.0 2,788,419 - -0.8 2,788,419 - -0.6 2,788,420 + -0.6 2,788,420 + -0.2 2,788,420 + -2.9 2,788,421 - -0.6 2,788,482 + +1.1 2,789,475 + +2.8
Or see this region's nucleotide sequence