Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2294 and Echvi_2295 are separated by 53 nucleotides Echvi_2295 and Echvi_2296 are separated by 294 nucleotides Echvi_2296 and Echvi_2297 are separated by 103 nucleotides
Echvi_2294: Echvi_2294 - Predicted transporter component, at 2,717,500 to 2,718,081
_2294
Echvi_2295: Echvi_2295 - YeeE/YedE family (DUF395)., at 2,718,135 to 2,718,572
_2295
Echvi_2296: Echvi_2296 - Arabinose efflux permease, at 2,718,867 to 2,720,048
_2296
Echvi_2297: Echvi_2297 - methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain, at 2,720,152 to 2,722,212
_2297
Position (kb)
2718
2719
2720
2721 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2717.911 kb on - strand, within Echvi_2294 at 2717.946 kb on + strand, within Echvi_2294 at 2717.947 kb on - strand, within Echvi_2294 at 2718.031 kb on - strand at 2718.050 kb on + strand at 2718.102 kb on - strand at 2718.102 kb on - strand at 2718.143 kb on + strand at 2718.187 kb on + strand, within Echvi_2295 at 2718.188 kb on - strand, within Echvi_2295 at 2718.188 kb on - strand, within Echvi_2295 at 2718.275 kb on + strand, within Echvi_2295 at 2718.275 kb on + strand, within Echvi_2295 at 2718.275 kb on + strand, within Echvi_2295 at 2718.276 kb on - strand, within Echvi_2295 at 2718.279 kb on + strand, within Echvi_2295 at 2718.279 kb on + strand, within Echvi_2295 at 2718.280 kb on - strand, within Echvi_2295 at 2718.280 kb on - strand, within Echvi_2295 at 2718.280 kb on - strand, within Echvi_2295 at 2718.280 kb on - strand, within Echvi_2295 at 2718.378 kb on - strand, within Echvi_2295 at 2718.422 kb on - strand, within Echvi_2295 at 2718.506 kb on - strand, within Echvi_2295 at 2718.513 kb on - strand, within Echvi_2295 at 2718.541 kb on - strand at 2718.541 kb on - strand at 2718.546 kb on - strand at 2718.606 kb on + strand at 2718.607 kb on - strand at 2718.635 kb on + strand at 2718.724 kb on + strand at 2718.835 kb on + strand at 2718.859 kb on + strand at 2718.859 kb on + strand at 2718.860 kb on - strand at 2718.866 kb on + strand at 2718.866 kb on + strand at 2718.867 kb on - strand at 2718.980 kb on - strand at 2719.003 kb on + strand, within Echvi_2296 at 2719.003 kb on + strand, within Echvi_2296 at 2719.003 kb on + strand, within Echvi_2296 at 2719.003 kb on + strand, within Echvi_2296 at 2719.003 kb on + strand, within Echvi_2296 at 2719.003 kb on + strand, within Echvi_2296 at 2719.003 kb on + strand, within Echvi_2296 at 2719.004 kb on - strand, within Echvi_2296 at 2719.064 kb on + strand, within Echvi_2296 at 2719.064 kb on + strand, within Echvi_2296 at 2719.065 kb on - strand, within Echvi_2296 at 2719.068 kb on + strand, within Echvi_2296 at 2719.068 kb on + strand, within Echvi_2296 at 2719.068 kb on + strand, within Echvi_2296 at 2719.069 kb on - strand, within Echvi_2296 at 2719.069 kb on - strand, within Echvi_2296 at 2719.069 kb on - strand, within Echvi_2296 at 2719.114 kb on + strand, within Echvi_2296 at 2719.115 kb on - strand, within Echvi_2296 at 2719.243 kb on - strand, within Echvi_2296 at 2719.244 kb on + strand, within Echvi_2296 at 2719.253 kb on + strand, within Echvi_2296 at 2719.253 kb on + strand, within Echvi_2296 at 2719.286 kb on - strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.521 kb on - strand, within Echvi_2296 at 2719.542 kb on + strand, within Echvi_2296 at 2719.555 kb on + strand, within Echvi_2296 at 2719.556 kb on - strand, within Echvi_2296 at 2719.591 kb on - strand, within Echvi_2296 at 2719.591 kb on - strand, within Echvi_2296 at 2719.649 kb on + strand, within Echvi_2296 at 2719.649 kb on + strand, within Echvi_2296 at 2719.650 kb on - strand, within Echvi_2296 at 2719.759 kb on + strand, within Echvi_2296 at 2719.799 kb on + strand, within Echvi_2296 at 2719.800 kb on - strand, within Echvi_2296 at 2719.905 kb on - strand, within Echvi_2296 at 2719.965 kb on - strand at 2719.985 kb on + strand at 2720.008 kb on - strand at 2720.066 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 2,717,911 - Echvi_2294 0.71 -0.1 2,717,946 + Echvi_2294 0.77 -0.9 2,717,947 - Echvi_2294 0.77 +0.7 2,718,031 - -0.4 2,718,050 + -2.6 2,718,102 - -0.0 2,718,102 - +0.0 2,718,143 + -1.7 2,718,187 + Echvi_2295 0.12 -1.4 2,718,188 - Echvi_2295 0.12 -0.1 2,718,188 - Echvi_2295 0.12 +0.5 2,718,275 + Echvi_2295 0.32 +1.6 2,718,275 + Echvi_2295 0.32 -2.1 2,718,275 + Echvi_2295 0.32 -1.8 2,718,276 - Echvi_2295 0.32 +0.3 2,718,279 + Echvi_2295 0.33 +0.7 2,718,279 + Echvi_2295 0.33 -0.8 2,718,280 - Echvi_2295 0.33 +0.1 2,718,280 - Echvi_2295 0.33 -0.2 2,718,280 - Echvi_2295 0.33 +1.4 2,718,280 - Echvi_2295 0.33 -0.4 2,718,378 - Echvi_2295 0.55 +0.3 2,718,422 - Echvi_2295 0.66 +1.6 2,718,506 - Echvi_2295 0.85 -0.1 2,718,513 - Echvi_2295 0.86 +0.3 2,718,541 - -0.3 2,718,541 - -0.2 2,718,546 - -0.8 2,718,606 + -0.1 2,718,607 - -1.3 2,718,635 + -2.2 2,718,724 + -1.5 2,718,835 + -0.6 2,718,859 + +0.4 2,718,859 + -0.8 2,718,860 - +1.8 2,718,866 + -1.8 2,718,866 + -0.9 2,718,867 - -1.8 2,718,980 - +2.4 2,719,003 + Echvi_2296 0.12 +1.4 2,719,003 + Echvi_2296 0.12 +0.7 2,719,003 + Echvi_2296 0.12 +2.0 2,719,003 + Echvi_2296 0.12 +0.6 2,719,003 + Echvi_2296 0.12 +1.5 2,719,003 + Echvi_2296 0.12 +2.3 2,719,003 + Echvi_2296 0.12 +1.3 2,719,004 - Echvi_2296 0.12 +1.9 2,719,064 + Echvi_2296 0.17 +0.6 2,719,064 + Echvi_2296 0.17 +1.1 2,719,065 - Echvi_2296 0.17 +1.4 2,719,068 + Echvi_2296 0.17 +2.6 2,719,068 + Echvi_2296 0.17 +1.5 2,719,068 + Echvi_2296 0.17 +0.6 2,719,069 - Echvi_2296 0.17 +1.0 2,719,069 - Echvi_2296 0.17 +2.3 2,719,069 - Echvi_2296 0.17 +2.6 2,719,114 + Echvi_2296 0.21 +1.1 2,719,115 - Echvi_2296 0.21 +1.0 2,719,243 - Echvi_2296 0.32 +1.4 2,719,244 + Echvi_2296 0.32 +1.3 2,719,253 + Echvi_2296 0.33 +1.3 2,719,253 + Echvi_2296 0.33 +1.0 2,719,286 - Echvi_2296 0.35 +0.8 2,719,520 + Echvi_2296 0.55 +1.3 2,719,520 + Echvi_2296 0.55 +0.4 2,719,520 + Echvi_2296 0.55 +1.1 2,719,520 + Echvi_2296 0.55 +0.9 2,719,520 + Echvi_2296 0.55 +0.7 2,719,521 - Echvi_2296 0.55 +0.3 2,719,542 + Echvi_2296 0.57 +1.5 2,719,555 + Echvi_2296 0.58 +1.0 2,719,556 - Echvi_2296 0.58 +1.5 2,719,591 - Echvi_2296 0.61 +1.8 2,719,591 - Echvi_2296 0.61 +1.1 2,719,649 + Echvi_2296 0.66 +0.6 2,719,649 + Echvi_2296 0.66 +3.9 2,719,650 - Echvi_2296 0.66 +2.4 2,719,759 + Echvi_2296 0.75 +1.5 2,719,799 + Echvi_2296 0.79 +1.2 2,719,800 - Echvi_2296 0.79 +0.6 2,719,905 - Echvi_2296 0.88 +2.0 2,719,965 - +1.7 2,719,985 + +0.3 2,720,008 - -0.6 2,720,066 + -2.5
Or see this region's nucleotide sequence